Gene Snas_5725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5725 
Symbol 
ID8886941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6091072 
End bp6092112 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content68% 
IMG OID 
Productagmatinase 
Protein accessionYP_003514448 
Protein GI291303170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.672273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCG AAAACCAGCT CCCGCCCGGT CTGCGGGCCC AGCTCGACTC CTCCTCCTAC 
ATGGGCGTGC CCACCTTCGG TCTGCGCCCG CACCTCTCCG AACCGGAACA ACTCGACGCG
TGGCGCCCCG ACGTCGCCAT CATCGGTGCC CCCTGGGACG ACAACACCAC CAACCGCCCC
GGAGCCCGCT TCGGCCCCCG CGCCCTGCGC GCCAACGCCT ACGACCCGGG CAGCTACCAC
CTCGACCTAG AGATCGAGAT ATTCGACCAC CTCGACGTCG TCGACTACGG CGACGCCATC
GTCAGCCCGG GCCTGTGGGA GCCCTCGAAA ACCGCCATCC ACCAACGCGT ATCCGAGGTG
ACCACCCGCG ACATCATCCC GGTCATCATC GGCGGCGACC ACTCCATCAC CTGGCCCGCC
GCCCTGGCCG TCGGCGCCCA CCACGGCCAC GGCCGCATCG GCATGATCCA CTTCGACGCC
CACGCGGACA CGGCCGACAT CGTCCGGGGC AACCTCGCCA GCCACGGCAC CCCCATGCGC
CGTCTCATCG AATCGGGCGC CATCACCGGA AAGCACTTCA TCCAGGTCGG TCTGCGCGGC
TACTGGCCCC CACCCGACGT CCAGGCCTGG ATGCGCGCCC AAGGCATGCG CCACCACACG
ATGCAGGAAA TCTGGGAACG CGGCATCCAA TCCGTGATGG ACGACGTCAT CACCGAAGCG
CTGGACGGCA CCGACGGCAT CTACATATCC ATCGACATCG ACGTCCTGGA CCCCGGCTTC
GCCCCCGGCA CGGGCACCCC CGAACCCGGC GGCCTCACCC CCGCCGACCT CCTGCGCGCC
GTCCGTCGCA TCGCCATGGA TACCAACGTG GTCGCCCTCG ACATCACCGA AGTCTGCCCG
CCATACGACC ACGCCGACCT CACCACCAAC AACGCCCACC GCCTGATCTG GGAAACCCTC
GCCGGTCTGG CCCACCGCAG GCGCCAAACC GACGCGGCCG CTAACCCTCC TGATCCGTCA
ACCGACGCGC CAACCAACTG A
 
Protein sequence
MTPENQLPPG LRAQLDSSSY MGVPTFGLRP HLSEPEQLDA WRPDVAIIGA PWDDNTTNRP 
GARFGPRALR ANAYDPGSYH LDLEIEIFDH LDVVDYGDAI VSPGLWEPSK TAIHQRVSEV
TTRDIIPVII GGDHSITWPA ALAVGAHHGH GRIGMIHFDA HADTADIVRG NLASHGTPMR
RLIESGAITG KHFIQVGLRG YWPPPDVQAW MRAQGMRHHT MQEIWERGIQ SVMDDVITEA
LDGTDGIYIS IDIDVLDPGF APGTGTPEPG GLTPADLLRA VRRIAMDTNV VALDITEVCP
PYDHADLTTN NAHRLIWETL AGLAHRRRQT DAAANPPDPS TDAPTN