Gene Snas_5671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5671 
Symbol 
ID8886886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6028581 
End bp6030638 
Gene Length2058 bp 
Protein Length685 aa 
Translation table11 
GC content72% 
IMG OID 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_003514394 
Protein GI291303116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0603036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCGG TCCTGCTCGC CACCACACCC GGCGCCCGGG CGGCGGTGGA CGAAGAGACG 
GTCTCGCAGC GACTCATCCG GCAGATCGGG AGCTTCAAGC CCCGCGACAT CACGGTCATC
ACCCGCCCGG AGTACCGGGC CGGGCTGCCC GCCGGTGTCA CCGTCATGAG TTCGGAGGGC
GTGCGCGAGG ACCTGCGGCT GCTGTCGGAC CTGGCCGCGG CCGGGGAACC GCTGCTGTTG
GCCTGCGCCG ACACGGTGCT GCCCGACACC GCGGTGTCGG CGGTGATGTC CGACCCGACC
TCCCGCAGTG GCGTCCTGGT AGGACAGTCC GATGGGGCTC GTCCGCTGGA CGTCCCGGTG
TTCAAGGACC GCGGGCTGGT GCTGTCGGTG TCGACCGGCT TCCACAAGGT CGCGCGCCCC
AACGCCGTCG CCAGTGGACT GCTCAAGGTC TCGCAGCCCT TCATGGACGA CCTCGACCAC
GGCCTGGGAC AGCTTCGCGA CGACAGCGTC GCCGACCTGG CGCCCGGCGC CGACGCCTGG
ACGCTGGTGC TGCTGGCGCT GGTACGGGGC GGCACCAAGA TGAACGCCTA CGCGGTTCCC
GGTCTGCCCT ACGGCCGGGT CGCCGGTGAG GCGGGCGCGC GGGCACTGCT GGCCGACATC
AAGGACACCG ACGAGGACGC CGTCCGGCTC GACCTGTGCG TCAAGAAGGA CGACGACCTC
TTCGCGACCT ACTGCATCAG CTCGTACTCC CGGCACGTGG TGAAGCTGTG CGCCAAGCTG
CGGCTCACCC CGGTGGGGGT GACCTGGCTG TCGATCCTGT TCGCGCTGGG GGCCGCGGCA
CTGTTCTTCC AGGCTTCGCG ACCGGCGCTC ATCGGCGGCG CGGTGGCCAT GTACGTCAGC
TTTGTCCTGG ACTGTGTGGA CGGACAGCTG GCCCGCTACA AGCATCGCTT CACCAACTTC
GGCGGCTGGC TCGACATGAT CGCCGACCGG GGCAAGGAGT TCATCCTCTA CGCCGGTCTG
GCCGCGGGCG CCGCCTCCCA GGGCCTGACC TGGGCGTGGC CGCTGGCGCT GGCCGCCATC
ACGATCCAGA CCTCCCGCCA CATGGTCGAC ACCTGGTACG GCGTGCTCCA GGACCAGGCG
ACGCTGCGCG GCGCGGTCCG CGAACTGACC GACCCGGTCG ACGGCTACGC CGCCCCGTCC
GCCGGTGGCG GTTCCGGCGG CGGCGCGGGC GCGCTGGCGG CCAAGATGGG CCGCAAACTC
GGCAAGCTGT CCGACCAGTT CGCCGCCCAC CGCCGCTCGC CGTCCTACTG GTTCAAGCGC
ACCATCGTGT TCCCGGTCGG GGAACGCTGG CTGGTCATGG GTGTCGGCGC CGCCGTCTTC
GACGGCCGGA TCGCGCTGGC GGCCCTGCTG ACCTGGCAGC TGATCGCCCT GACCTACATC
CTGGCCGGAC GCGGCCTGCG CGGCTGGGCC GCCAAGGTCG CCGTCCTGGA CGACGACACC
GCGACCTACC GCGACGACGG ACCGCTGCGG TCCATCCCCA TGCCGCTGAG CCTGCCGCCG
CTGCCGGTGG TGCTGTTCGG CCTGGTGGCC GTCACGGGCG GCGTCGTGTG GGCGGCCCTG
GACCACGAGT CCGGCTGGCT GGCCTCGCTG CTGGCCGCCG TCGGGCTGCT GTTGTCGCTG
ACGACGGCGC GCCACCGCCA CGACGGCCCC TTCGACTGGC TGATCCCCGG CATCCTGCGG
GCGGCCGAGT TCGGGCTCAT CATCACCGTC GGGCTGGCCG CCGAGGTCCC GTCGCCGCTG
ACCTTCGGGC TGCTGGCGGT GCTGGCGCTG TACCACTACG ACCTGGCCGC CCGGATCGAC
AAGGCCGCCT CGCCGATGCT GTCGCGCGCG GCGGGCCTGG GCTGGGACGG CCGCAGCCTC
GTGGTGCTGC TGGCGCTGAT CCCCGGCATC GGCACCTGGG TGTTCGCGAT CCTGCTGGGC
TACATCGCGC TGGTGTTCGT CGGCGGCGCG CTGGCCGGAC GGCGCGGCAA ACCCAAGGCC
GTCGCGGTGG CCGCGTAG
 
Protein sequence
MRAVLLATTP GARAAVDEET VSQRLIRQIG SFKPRDITVI TRPEYRAGLP AGVTVMSSEG 
VREDLRLLSD LAAAGEPLLL ACADTVLPDT AVSAVMSDPT SRSGVLVGQS DGARPLDVPV
FKDRGLVLSV STGFHKVARP NAVASGLLKV SQPFMDDLDH GLGQLRDDSV ADLAPGADAW
TLVLLALVRG GTKMNAYAVP GLPYGRVAGE AGARALLADI KDTDEDAVRL DLCVKKDDDL
FATYCISSYS RHVVKLCAKL RLTPVGVTWL SILFALGAAA LFFQASRPAL IGGAVAMYVS
FVLDCVDGQL ARYKHRFTNF GGWLDMIADR GKEFILYAGL AAGAASQGLT WAWPLALAAI
TIQTSRHMVD TWYGVLQDQA TLRGAVRELT DPVDGYAAPS AGGGSGGGAG ALAAKMGRKL
GKLSDQFAAH RRSPSYWFKR TIVFPVGERW LVMGVGAAVF DGRIALAALL TWQLIALTYI
LAGRGLRGWA AKVAVLDDDT ATYRDDGPLR SIPMPLSLPP LPVVLFGLVA VTGGVVWAAL
DHESGWLASL LAAVGLLLSL TTARHRHDGP FDWLIPGILR AAEFGLIITV GLAAEVPSPL
TFGLLAVLAL YHYDLAARID KAASPMLSRA AGLGWDGRSL VVLLALIPGI GTWVFAILLG
YIALVFVGGA LAGRRGKPKA VAVAA