Gene Snas_5599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5599 
Symbol 
ID8886814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5949000 
End bp5951294 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content71% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003514322 
Protein GI291303044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GCTCGAAACT GGCGCTCATC CTGCTGATAC CGCTGGTGGC GCTGTCGGGG 
GTGGTGGCGG TGCGGCTGGT CGACTCGACA TTGGAGGCCC TGCGCATCGG CGACACCGCC
CGCGTCGTCG AACTGACCAA GACCGTCGCC GAGACCCTGA GCGCGCTACA GGAGGAACGC
CACCAGATGG CGGTCCAGAT CTACGGCGAC GAACTGAACC TCGACGAGGA CCAGCGCGAC
CTGCGGCATC TGGACGAGGC CGTCTACGCC ACCGACGAGA AACTCGGCGC GCTGAAACAG
GCCCGCGAGA CCTTCGAGGG TGACGCCGAG GTCAGGGAAC AGCTGGAGCA GGCCGACAAA
CCGCTCAACC GGCTCGACCG GGTCCGCTCC GCCGAACTCG ACGAGTCCGA AGAGGTCTAT
CTGACCGTCT ACGACGCGGC GGTGCGGCGG CTGATGCGGG TGCTCGACCG CGCCGTCGAC
CTCGTCGACG ACGCCGAACT GAGCCGGCGG GTGCGGGCGG CTTCCCTGCT GGCGTCGGCG
GACGAGTACT CCGAGCGGCT GCGGGTACTG ATCCTGCAAC TGCCGGACGG CAAACCGCTG
GCGGCGGCCT ACCGGCCCTT CATGACGCTG AGCCTGTCGC GGTCGCAGAC GATGAGCGAG
TACCGGCGCA TCGGCGGCGA GGCCGTGTTC GAGGCCGGTG GTCTGGGCGG TGGCGCCGCC
CGTCCGGCCA ACTCGCTGGA GAGCACCGTG GCCACCAGCC GCACCGACGA GAACGTCGAC
ATCGACCACG CCGAACTCAT GGGCGCCTAC GACGCCCGGC ACAAGGACAC CGCCACCTAT
GTGGACGACA CCCAGGACTC CGCGGTGACG CTGGCCCGCT CGATCCGCGA CGACGTGGTG
CTGCGGGTGC TGATCGAGAC CGTGATCGTG CTGCTGACCG TCGCCGTGGC CGTGATGGCG
ACGCTGTGGC TGGGCCGTCC CGTCATCCGG GGACTGCGGC AGCTGCGCGA CTCGGCCCGC
CGCATCGCCT ACGAGGAACT GCCCACCGCC GTCAAGCAGG TCAGCGAGCA CGAGGGCCTG
GCGGGCCTGA CCCCGCGCGA GTTCGCCGAC AACACCGCCG CCCCGCTCAA GACCCAGGGC
GCCGCCGAGA TCATCGAGGT CGGGGAGGCG TTCGACGACG TCCACCACGA GGCGATCCGG
GTGGCCGCCG AACAGGCGCT GCTACGGGTC CACATCGGAA CGATGTTCGT CCGGCTCGCC
CGGCGCGGCC ACTCGCTCAC CGGGCGGCTC ACCGCCACAC TGGACGAAGC CGAGCGCGAC
GAGCAGGACC CCAACCGGCT GCAACTGCTG TTCCGGCTGG ACCACCTGGT GGCACTGCTG
GGACGCGCCA ACGACAGTCT GCTGGTGCTG GGCGGCGCCG CCGCGGCCCG GGTGCGCACC
AGCGACGAGA AACTCAACGA CGTCCTGACC GCGGCCCAGT CCCACACCGA GCACTACACC
CGCATCAACG TCACCACAGT GGACGAGGGC GTGTGGATCT CCTCGACGGC CGTCGAGGAC
GTGGTGCAGA TCCTGGCCGA ACTGATGGAC AACGCCACCC AGTACTCGCG CCACCCCACC
GAGGTGATCG CGCGCTACCT CACCGACCGG GTCGTGATCC AGATCCGCGA CTACGGCATC
GGCATCGATC CACAACGGAT GTCCCGCTAC AACGCCCGAC TGGGCACCCG GGCGCCGCTC
GACCTGGAGG CGATGCAGTC GATGGGCCTG ACCGTGGTCG GGCAACTGGC GAAACGGCAC
GGCATCCAGG TGCGGCTGCA ACCGGCCACC GAGAGCTCCG GCACCACCGC CGAGGTCGTG
CTGCCGCACT CGATCCTGCG CTTCGCCCGC GACCTGACGC AGCAGCGGCA GCTCAGCAAC
GCCGCCCCCG CCGACGCCAC GGAGGCGCCA CTGTTCCGGG GCGGCCTGCT GGGCATCGGC
AGCGGACCCG CCACCGTCCC CGACGCCGCG GCCGGGCTGC CGGTCATCCA CTTCGAATGG
CAGACGGTGC ACGCCGACAG CTCGCTGCGC GCCGGCGCCG CGCTGCCCAG CCGGGAGACC
ACCTACGACG AGGTCACCGG GCTGCCCCGC CGACGCCCGC GATCCCAGCT GGTTCCCGGC
GCGGTGGCAC CGACCCACGA CCGTCCCGAC GCGCCCGCCC GGCGCGACCC CGAAGCGATC
GGCGCCACCT ACACCGCCTT CGCCCGGGGA CTGTTCGGTG ACGCCGGCGC TTCGCCCACA
GACTCAAGGA GCTAA
 
Protein sequence
MRIGSKLALI LLIPLVALSG VVAVRLVDST LEALRIGDTA RVVELTKTVA ETLSALQEER 
HQMAVQIYGD ELNLDEDQRD LRHLDEAVYA TDEKLGALKQ ARETFEGDAE VREQLEQADK
PLNRLDRVRS AELDESEEVY LTVYDAAVRR LMRVLDRAVD LVDDAELSRR VRAASLLASA
DEYSERLRVL ILQLPDGKPL AAAYRPFMTL SLSRSQTMSE YRRIGGEAVF EAGGLGGGAA
RPANSLESTV ATSRTDENVD IDHAELMGAY DARHKDTATY VDDTQDSAVT LARSIRDDVV
LRVLIETVIV LLTVAVAVMA TLWLGRPVIR GLRQLRDSAR RIAYEELPTA VKQVSEHEGL
AGLTPREFAD NTAAPLKTQG AAEIIEVGEA FDDVHHEAIR VAAEQALLRV HIGTMFVRLA
RRGHSLTGRL TATLDEAERD EQDPNRLQLL FRLDHLVALL GRANDSLLVL GGAAAARVRT
SDEKLNDVLT AAQSHTEHYT RINVTTVDEG VWISSTAVED VVQILAELMD NATQYSRHPT
EVIARYLTDR VVIQIRDYGI GIDPQRMSRY NARLGTRAPL DLEAMQSMGL TVVGQLAKRH
GIQVRLQPAT ESSGTTAEVV LPHSILRFAR DLTQQRQLSN AAPADATEAP LFRGGLLGIG
SGPATVPDAA AGLPVIHFEW QTVHADSSLR AGAALPSRET TYDEVTGLPR RRPRSQLVPG
AVAPTHDRPD APARRDPEAI GATYTAFARG LFGDAGASPT DSRS