Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5395 |
Symbol | |
ID | 8886604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5726331 |
End bp | 5727218 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | fatty acid hydroxylase |
Protein accession | YP_003514120 |
Protein GI | 291302842 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.291326 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACCA GAACGCTGAA ACCACTGGTC CGTTACGGGT ACGCACCCGC CATGCTCCTC GGCGTCAACG GAGCAGGCAT CGCCATCGCC TCGGCCGGCG CTCCCAAAGC CTGGCTGTTG GGCCTGCTCG GTCTGGCGGT CGCACTGTCC TTCGCCGCCG AACGCGTCCT GCCCTACGAA GACACCTGGA ACCACGACCA CGGCGACACC CGCCGCGACA CCATCCACAC CTTCGTCAAC GAAACCCTCA TCCTCGCCAG CGTCGCCGCC ATCCCCGCCC TCGCGATCCT TACGCCCGGC GACGGCATCT GGCCCCACCA CTGGCCCTTC GTCCTCCAAG TACTCGCCGC GATCCTAGCC GCCGACCTCG GGATCACCCT CATCCACTAC GCCAGCCACA AGATCGACGC GCTGTGGCGC TTCCACGCCG TCCACCACTC CGCGAAGCGC TTCTACGGCC TCAATGGACT CATGAAACAC CCGCTCCACC AAACCATCGA AATGGCCGCC GGAGTCGCGC CACTCATCCT CATCGGACTT CCCGCATCCG TGGCATCGAC TCTCGCCCTG GCCGTGGCAG TGCAACTGCT GCTGCAACAC TCCAACGCCG ACTACCGCGT CGGCGCCCTC AAACACGTCC TCGCCCTCAA CGAAGGCCAC CGCTTCCACC ACCTCAAATG GGCAGGCATC GGCGACGTCA ACTTCGGACT ATTCACCCTG GCCTGGGACT ACCTGCTGCG CACCAAAACC TACGACCCCC ACCGCCGCTT CACCTCCGAG ATCTTGGGCA TGGCCGCTCA CCCCGACTAC CCCACGGCAT ACCTACCGCA GCTGGCCGAA CCATTCCGCG CATCCGGAGC CTGCACGACC GACGACACGG CCCCGTGA
|
Protein sequence | MTTRTLKPLV RYGYAPAMLL GVNGAGIAIA SAGAPKAWLL GLLGLAVALS FAAERVLPYE DTWNHDHGDT RRDTIHTFVN ETLILASVAA IPALAILTPG DGIWPHHWPF VLQVLAAILA ADLGITLIHY ASHKIDALWR FHAVHHSAKR FYGLNGLMKH PLHQTIEMAA GVAPLILIGL PASVASTLAL AVAVQLLLQH SNADYRVGAL KHVLALNEGH RFHHLKWAGI GDVNFGLFTL AWDYLLRTKT YDPHRRFTSE ILGMAAHPDY PTAYLPQLAE PFRASGACTT DDTAP
|
| |