Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5388 |
Symbol | |
ID | 8886597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5720214 |
End bp | 5721707 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003514113 |
Protein GI | 291302835 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.836925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTA ACAAGCAGCA CCCCGCCGAG ACCGTTGCCG TCATCGGAGC CGGTCCAGTC GGTTTGGCCG CCGCCGCGCA CTTGGTGGAG CGTGGCATAA CCCCGATCGT GCTGGAGACC GGAGACGGCC CCGGAGCGGC GATCCGGCAG TGGGGACACG TGCGGTTGTT CTCTCCGTGG CAGTTCGACA TCGACGCCGC CGCGCGTCGG CTGTTGGAAG CGAATGGTTG GACGGCACCG AATCCGGCGC ACCTGCCCAC TGGCGCCGAA CTGGTCGATG ACTACCTGGC TCCGCTGGCG GCCTTGCCGG TGTTGGAGCC GCACATTCGT TACAACACCG CCGTGGTCGC GGTTTCCCGC TACGGCGTGG ACGTCACCCG CACTGTTGGC CGCGACCGGC GTCCTTACCT GGTGCGCACC CGCGATCAGG CGGGTGGATA CACCGACGTC ATCGTCGATG CGGTCATCGA CGTCTCGGGC ACCTGGGGCC GGGCGAACCC ATTGGGAGCT CACGGCCTGG CCGCTCCTGG TGAAGTCGAC GCCGCTGGGT TCATGGCCGG TGCGTTGCCG GACGTGCTGG GCGCCGAGCG GGAACGGTTC GCGGGCAAGC ACACCTTGGT TGTCGGGATG GGACATTCGG CGGCCAACAC CCTGCTGAAC CTGGCCGACC TCGCCGAGCA GGCCGATGAC ACCCGGATCA CGTGGGCGAT CCGCGGCGGC TCGGCCGCTC GGTTGTACGG CGGAGGTGAC GCCGACGCGT TGCCCGCGCG CGGCAAGCTC GGTACGCGGC TCAAGCAACT GGTCGCGGAC GGCAAGCTCA CCATGGTGAA CAAGTTCGTC ATCGACGAGT TCGTCCCAGC CCCGGCAGGG GCCGGATCGG TGACGGTGGT GGGCCGCTCG GGCGATGAAG CGGTCAAGCT CGATGTGGAC GTCGTCGTGG CCGCCACCGG GTTCAGGCCC GACCTGGAAA TGTTGCGCGA GGTGCGACTC GACCTCGACC CGGGTGTGGA GGCCCCGGCG AAGCTGGCGC CGCTGATCGA CCCGAACTTC CACTCCTGCG GAACCGTTCC CCCGCACGGC GAGAAAGACC TCGCCCACCC CGACGAGGGT TTCTACCTGG CCGGTATGAA GAGCTACGGC CGCGCCCCGA CCTTCCTGCT GGCCACCGGA TACGAGCAGG TGCGGTCCAT TGCCGCAGCG CTGGCCGGGG ACCGCGAAGC CGCCGACGCT GTGCAGTTGG AACTGCCCGA GACAGGCGTC TGTTCTTCCA GCCCCACCAC CGAGAACGCC GACGGCTCGG TGACCTTCGC CGAACCCACC GCATCCGACT GCGGCAGCGG CGGCGGTTGC GGCACCACGC AACCGGTCGA CACCGGCAAG GGCTTGGCAA CCGGTGTCCT GCACGGCTAC TCGGGCGAAC CGGTCGAGCT CCCTGTTCTC CAGGCTGCTG AACCCGCAGG CGGCTGCTGC GGCAACCAGC CCGCCAACGC ATGA
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Protein sequence | MSRNKQHPAE TVAVIGAGPV GLAAAAHLVE RGITPIVLET GDGPGAAIRQ WGHVRLFSPW QFDIDAAARR LLEANGWTAP NPAHLPTGAE LVDDYLAPLA ALPVLEPHIR YNTAVVAVSR YGVDVTRTVG RDRRPYLVRT RDQAGGYTDV IVDAVIDVSG TWGRANPLGA HGLAAPGEVD AAGFMAGALP DVLGAERERF AGKHTLVVGM GHSAANTLLN LADLAEQADD TRITWAIRGG SAARLYGGGD ADALPARGKL GTRLKQLVAD GKLTMVNKFV IDEFVPAPAG AGSVTVVGRS GDEAVKLDVD VVVAATGFRP DLEMLREVRL DLDPGVEAPA KLAPLIDPNF HSCGTVPPHG EKDLAHPDEG FYLAGMKSYG RAPTFLLATG YEQVRSIAAA LAGDREAADA VQLELPETGV CSSSPTTENA DGSVTFAEPT ASDCGSGGGC GTTQPVDTGK GLATGVLHGY SGEPVELPVL QAAEPAGGCC GNQPANA
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