| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5015 |
|---|
| Symbol | |
|---|
| ID | 8886222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5321641 |
|---|
| End bp | 5323644 |
|---|
| Gene Length | 2004 bp |
|---|
| Protein Length | 667 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Male sterility domain-containing protein |
|---|
| Protein accession | YP_003513745 |
|---|
| Protein GI | 291302467 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.435156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.471467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGA ACACCCCTCA CCGTCCCGAC GCCGTCGTCT TCGGCGCCAC CGGTTTCCTC
GGCCGCTGGA CGACACTGGA ACTGCTGCGG CAGGGCCGCT CGGTCGCGGC GGTGATCCGG
AAGCCCGGTG GCCTGGCGGC CTCGGGGCAG ACCCGGGAAG CCGAGCTTCG CGGATGGTTT
ACCGACCACG GCGCGAGCAC CGAAGGCCTG ACGGTTGTCG GCGGGGATCT CACCAGCGAT
GCCGCTCTGG GCATCGACGC GGCGGACGAG CGGCGGCTGG GCGACGTCCG CGACGTGTTC
AACCTTGCTG GTAACTACCG GTTCGGGATG GCGCGTCCTG AAGCGCGCAT CGTCAACGTC
GACGGTGCTC TCAATGTGCT GAACTGGGCC GCCGCTCGGC GGGACCTGCG CCGACTGATC
CATGTGTCCG GGTATCGGGT CAGCCCGCGT GATGAGCCCA GGTACCCGAT CCCGGAGTCT
GAACTGGACC GGCTTTATCG GACGATGGGC GCGTACGAGG CGTCCAAGAT CGAGGCCGAC
GCGGCGGTTC GGGTCGTGGC CGACCGGCGC GGTGTTCCGC TGACCGTGGT GAATCCGTCG
GCCGTGATCG GCCACTCCGA AACCGGCGAG GCCGGTCAGT ACATCGGCCC GGCGGAACTG
GTTCGCCAGC TGTGGAACGG GAAGCTGCCC GTGCTGCCGG GTACGGCTGA GACTTTCGTT
CCTGTGGTTA CAGTGGACTA CGCCGCTAAG TTCCTGTGCG CCATACCCGA ACACGATTCG
CTCCCTGGTG GACGGCACTG GCTGCTCGAC GATGAGACGC CTCGGTTGCC TGAGCTGGTG
TCGCTTGTGG CTGAGCGGTT CGGGGTGCGG GCGCCTCGTC GGCTCGTGCC TGTGGGTGTG
GTGCGTCGTC TGCCCGCGGC GATTACTGGT GCTGATCCCG AGACGTTGAC GTTCCTGTCG
GAGGATCGGT ACGACACGGG CTCGGCCGAT CGGGTCGCGC GCTCGGCGGG GCTGTCGCAT
CCGCCGGTGG AGACCGCGTT GCGTCGGTGG GCGGATCGGC TGGTGGCGGA CGGGTTCGGG
ACGCTGTCGG CCGTGTCGCC GGGAGGGTTC GCGGATGTCG CGGGTTCGCA GACGTACTTG
GCGGGGGATC GGATCACGCC CGATGTGGTT CTGCTGCATG GGTTGCCGCT TGACGGTGAG
TCCTGGCGGC CGGTGCTGGG TGAGCTGTCC ACGGCGGACG CTAGCAGTGG TTTGTCTACA
CTGGTCGCTG ATTTGCCGGG GCTGGGGCGG TCGGCGGGGA GCGCGGTCGA CGTCGGGGAG
TGGATGGCTG ATTTGTTGGC GCCGATCCGG ACTCGGCCGG TCATCGTCGC CCACTCGGCT
GCGACGGCGC TGGCGTTGCG GTACGTCGCG TCTGAGCCCG AGAAGGTCGC GGGGCTCGTT
CTCGTGTCGC CGTACTTCAT TCAGCGACGC ACTCCCGCGC CGTTGCGGAT TCCGGCGATC
ACGGCGCCGG TTCTCAAGCG ATTGCCTCGT GCGCGCCTGG ATGCGCTGCT CGGTGTGGCT
GAGGCGGCGA CCGCTGCGGC CGGTGCCCCT GGCGTGACCG CGAGAGCCGC GAACGCGATG
GCTGCAACGG CCACGACCGG CGCAGCAGCC ACGACCGCCG CAACGGCCGC CAACGGTGCG
ATCGCGCCCG CCGCGACCGA GGCGGCCGTC GAAAGCGCCG CCGCGTCACT GCGCCGTCCC
GGCGTCGCCC GTCGCATGGC CCGCATGCTC AAACACGGTG GCCGGTCCGG TGAGCGAGCC
GCGCTGGAAC GGCTGCTGCG GGACCTCCCG TCGAGTGTGC CGCTCCACAT CGTCCACGGC
GAGCATGATC CGCTGATCGG TGATCCGGGT CCCGGCACCG TGTCCACAAT CCCCGGAGCT
GGGCACAATC CACAACTGAC ACACCCCGCC GCTGTCACCG CGATCCTGCG GGAGGTGACG
CTCGCGACGC GGATCCCACG GTGA
|
|---|
| Protein sequence | MTANTPHRPD AVVFGATGFL GRWTTLELLR QGRSVAAVIR KPGGLAASGQ TREAELRGWF
TDHGASTEGL TVVGGDLTSD AALGIDAADE RRLGDVRDVF NLAGNYRFGM ARPEARIVNV
DGALNVLNWA AARRDLRRLI HVSGYRVSPR DEPRYPIPES ELDRLYRTMG AYEASKIEAD
AAVRVVADRR GVPLTVVNPS AVIGHSETGE AGQYIGPAEL VRQLWNGKLP VLPGTAETFV
PVVTVDYAAK FLCAIPEHDS LPGGRHWLLD DETPRLPELV SLVAERFGVR APRRLVPVGV
VRRLPAAITG ADPETLTFLS EDRYDTGSAD RVARSAGLSH PPVETALRRW ADRLVADGFG
TLSAVSPGGF ADVAGSQTYL AGDRITPDVV LLHGLPLDGE SWRPVLGELS TADASSGLST
LVADLPGLGR SAGSAVDVGE WMADLLAPIR TRPVIVAHSA ATALALRYVA SEPEKVAGLV
LVSPYFIQRR TPAPLRIPAI TAPVLKRLPR ARLDALLGVA EAATAAAGAP GVTARAANAM
AATATTGAAA TTAATAANGA IAPAATEAAV ESAAASLRRP GVARRMARML KHGGRSGERA
ALERLLRDLP SSVPLHIVHG EHDPLIGDPG PGTVSTIPGA GHNPQLTHPA AVTAILREVT
LATRIPR
|
|---|
| |