Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4977 |
Symbol | |
ID | 8886184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5286907 |
End bp | 5287611 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003513708 |
Protein GI | 291302430 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.111601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGTCA CACCCGCCGC GAACAGTCAG TGGCCCACCG GCACCTTACT ACACCACTTG TCCCCTTCGG ACCGTCGAGA ACTGATCTCC CTGGGCACCA AGAAATGGGT CCGTCCGGGA ACGGTACTGC TGCGCGCCGG GGACACCGGC ACCACGGCGA TTCTGATCCT GCGCACCTTC GTCAAGGTGT CGATGCCGAC GGCCAACGGC CACGAGACCC TGCTGTCGGT ACGGGTTCCC GGTGACATCG TCGGCGAGAT CTCGGTGCTC AACGACCAGC CCCGGACGGC GACGGCCACC ACCTGCGGCA CCGGACTGGT CAGCGTCATC CCGAGCCCCT CGCTGAAGGA GTTCATGTCG GAACGTCCGG CCGTCGGCGC CGAACTGGCC GGGACGGCGG CCGATCGGCT GCGCTGGACG AACGAACCCC GCGCGGACGT CGGCAGCCTC CCGGTGGTCG CCCGGCTGGC GCGGCTGCTG TCGGATCTGG CGATCCGGCA CGGGGTCCGT ACCGAGCAGG GCATCGAGAT CAGCGTGATG TTGACGCAGT CCGAACTGGC CTCGCTGATC GGCGTGTCGG TGGTGACGGC GCAGCGCGCG ATCAAGCGGC TGCGGGACCA GGGCGTGATC GAGACCGGAT CCCAGCGGTT TCTGGTCACC GACCCACACC GTCTGGAGCT GGAGGCCGCT GCGCCGCCAC GGTGA
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Protein sequence | MSVTPAANSQ WPTGTLLHHL SPSDRRELIS LGTKKWVRPG TVLLRAGDTG TTAILILRTF VKVSMPTANG HETLLSVRVP GDIVGEISVL NDQPRTATAT TCGTGLVSVI PSPSLKEFMS ERPAVGAELA GTAADRLRWT NEPRADVGSL PVVARLARLL SDLAIRHGVR TEQGIEISVM LTQSELASLI GVSVVTAQRA IKRLRDQGVI ETGSQRFLVT DPHRLELEAA APPR
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