Gene Snas_4977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4977 
Symbol 
ID8886184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5286907 
End bp5287611 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_003513708 
Protein GI291302430 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.111601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTCA CACCCGCCGC GAACAGTCAG TGGCCCACCG GCACCTTACT ACACCACTTG 
TCCCCTTCGG ACCGTCGAGA ACTGATCTCC CTGGGCACCA AGAAATGGGT CCGTCCGGGA
ACGGTACTGC TGCGCGCCGG GGACACCGGC ACCACGGCGA TTCTGATCCT GCGCACCTTC
GTCAAGGTGT CGATGCCGAC GGCCAACGGC CACGAGACCC TGCTGTCGGT ACGGGTTCCC
GGTGACATCG TCGGCGAGAT CTCGGTGCTC AACGACCAGC CCCGGACGGC GACGGCCACC
ACCTGCGGCA CCGGACTGGT CAGCGTCATC CCGAGCCCCT CGCTGAAGGA GTTCATGTCG
GAACGTCCGG CCGTCGGCGC CGAACTGGCC GGGACGGCGG CCGATCGGCT GCGCTGGACG
AACGAACCCC GCGCGGACGT CGGCAGCCTC CCGGTGGTCG CCCGGCTGGC GCGGCTGCTG
TCGGATCTGG CGATCCGGCA CGGGGTCCGT ACCGAGCAGG GCATCGAGAT CAGCGTGATG
TTGACGCAGT CCGAACTGGC CTCGCTGATC GGCGTGTCGG TGGTGACGGC GCAGCGCGCG
ATCAAGCGGC TGCGGGACCA GGGCGTGATC GAGACCGGAT CCCAGCGGTT TCTGGTCACC
GACCCACACC GTCTGGAGCT GGAGGCCGCT GCGCCGCCAC GGTGA
 
Protein sequence
MSVTPAANSQ WPTGTLLHHL SPSDRRELIS LGTKKWVRPG TVLLRAGDTG TTAILILRTF 
VKVSMPTANG HETLLSVRVP GDIVGEISVL NDQPRTATAT TCGTGLVSVI PSPSLKEFMS
ERPAVGAELA GTAADRLRWT NEPRADVGSL PVVARLARLL SDLAIRHGVR TEQGIEISVM
LTQSELASLI GVSVVTAQRA IKRLRDQGVI ETGSQRFLVT DPHRLELEAA APPR