Gene Snas_4958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4958 
Symbol 
ID8886165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5267265 
End bp5268338 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513690 
Protein GI291302412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.75067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAG TCCTGAAGCG ACACGTACTG CCCGTGTGTG TCGCGACCGC GAGCCTCGCC 
GCGATCACCC TGGCCACCCC CGCCCACGCC CACGACGGAT TCAAAGCCTC GAACCTCAGC
TGGCAGCTGA CCGACACCGG GGTCGACAAC CAGTTCCGGG GCCTGGCGGC CGTCGACGAC
GACACCGCCT GGGTCGCCGG AACCAAGGGC ACGGTGCTGC GCACCACCGA CGGCGGTGAC
AGCTGGGACA ACGTCTCCCC GGCCGGGGCC GAGGGCCTGG AGTTCCGGGA CATCGAGGCC
TACGACGACG AACACGCCGT CGCGCTGTCG ATCGGGGAGG GCGAGGCGTC GCGGGTGTAC
GTCACCGACG ACGGCGGCGA CAGCTGGCAC AACTCGTTCA CCAACGCCGA ACCCAAGGCG
TTCTACGACT GCATGGCCTT CTTCGACGCC AAACACGGTG TCGCCATGAG CGACCCTGTC
GACGGCCGGA TCCGCTTCAT CACCACCGAC GACGGCGGCC ACAGCTGGGA CATGCTGCCG
CCCGAGCGGT CGCCCGAAGC CCTTGCGGGC GAGTTCGCGT TCGCCGCCAG TGGACAGTGC
CTGGTCGCCG CCGACAAGAG GAACGGCTAC CTCGTCACCG GCGGCGGCGA GACCGCGCGC
GTCATCCACA CCCCCGACCG GGGCCAGAGC TGGGAAGCCC ACGACACGCC GGTGGCCAGC
GGGCCGTCGG CGGGCATCTA CGCCGCCGCG TTCCGCGACA CCAAACGCGC GATCCTGGTC
GGCGGCGACT ACACCACCCC CGACGCGGTG AAAGACGCCG CCGCCTACAC CCGCAAGGGT
GTCGAGAACT TCGCGCTGTC GCCGGGGGAG CCGGGCCAGT ACCGCTCCTC GGTGGCCTAT
GTGGCCGGTT CGATCGCGAT CACCGTCGGC CCGACCGGCA GCGACCTGAC CGTCGACAAC
GGACGCGACT GGCACCGCTT CGACGACGGC GCCTTCGACA GTGTCGAGTG CGCCAAGTTC
GCTTGCTGGG CGTCGGGACC CAAGGGCCGT ATCGCCACGT TGGAACTGGG CTGA
 
Protein sequence
MNRVLKRHVL PVCVATASLA AITLATPAHA HDGFKASNLS WQLTDTGVDN QFRGLAAVDD 
DTAWVAGTKG TVLRTTDGGD SWDNVSPAGA EGLEFRDIEA YDDEHAVALS IGEGEASRVY
VTDDGGDSWH NSFTNAEPKA FYDCMAFFDA KHGVAMSDPV DGRIRFITTD DGGHSWDMLP
PERSPEALAG EFAFAASGQC LVAADKRNGY LVTGGGETAR VIHTPDRGQS WEAHDTPVAS
GPSAGIYAAA FRDTKRAILV GGDYTTPDAV KDAAAYTRKG VENFALSPGE PGQYRSSVAY
VAGSIAITVG PTGSDLTVDN GRDWHRFDDG AFDSVECAKF ACWASGPKGR IATLELG