| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4801 |
|---|
| Symbol | |
|---|
| ID | 8886008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5096398 |
|---|
| End bp | 5097978 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003513535 |
|---|
| Protein GI | 291302257 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGACT ACCCTGCCCT GGAAGGGTGC GAGCCAGGGG GATTCGACCG CGCGGCCCAG
GAGGCGGGTG AACTGGCGCA GAACGTCGAG TCCATGATCG ACGAACTGGA GGCCCTGGTA
CCGGTACTGA GCGGTGCCGA CGACGACTTC GCGACCGTCA ACGCGATTCG GGACCGGGTC
GCCGCCGAGA CCGATCGGCT CCGGGAAGCG CAGCTGTCAC TGCGCACCAT CGAGACGTCG
CTGCTGAGCC TCGGCGAGGA CGTCCGGCGT GGCCGAATGG AACTCGAAGA GGCACGTAGG
CGCGCCGACA AGTTTGCCAA AGTGGACTAC TCGCTGGGTG TCATCACGCT CGACTTCGGC
AAGGTACCGC AGGCTGACGC GGACCCCAAG GGATTCGCCC GCTTCAAGGC CCAGCTGCGC
GATGTCGCCG ACCAGATGCG GCGCGCCCAC ACCCTGGCCA ACACCAGTGA CTATGACGCC
GCCTCCGACA TCGCCAAGAA GTCACCCGCG CTGACCGAGC CGGGCCCGAG CCGGATCCGC
AGCCCCTACG AGAACCACAG CTGGTGGACC GGCCGCTCGG CCGCCGAACG GGAACACCGG
ATCGAGACCG AACCCAACCT GGTCGGCGGA CCCGACAGTG ACGGCATCCC CAGCGCCGCG
CGCAGCGCGG CGAACGAACA GTTGCTGCGG CAACACATTC GCGAGCTGGA AGAGCGCGCC
GCGTCGGGCA GCGGCGCGGC GTCCCGACTG CTCGCGGTGA TGCTCGCCGT CCAGCACCGG
CTTGCCGACG ACGCCAGCGA CGGCACCCGG GAGCGGGCGT TCCTGCTGTT GGCCGAACCT
TCCGACCCGG GCCGCATCGT GCTGGCGATC GGCAATCCCG ACATCGCCGA CCACGTCATC
GTCCACATTC CCGGCACCGG TGCCTCGCTG CCCAAGCTCG CAGGGGAAAT CGCCCGCGTC
GAGCGGATGG TCGGCGACGC CAACCTCTAC GAGACCCGCC ACACCGCCGG GATCCTGTGG
CTGGGTTACG ACGCCCCGCC GAACCTGTTC GCGGCCGCGA CCAAGCGCTA TGCGCAGTCG
GCCACAAAGC CGTTGCCGAG GTTCCTGACC GGCATTCGGG CGGTGCGCAG ACGCGGCCTG
GACCGCTTCG GCGTGACCGT GATGGGACAC TCCTACGGCA CCGTCGCCAT CGGGTTCACC
GTCCGGGAAC AACAGGTGTC CGCCAGCCAG CTGATCCTGG TGGCCAGCCC GGGGGTCGGC
GTCAAGTCGG CGGACCAGCT GAAGATCGAC AAGGACGACG TCTACGCCAC CACGGCTCCC
AACGACATCA TCCACAGAGT TCCCAGAGTC CCCCATGGAA CCTCCCCGGT CCACAAATCC
TTCGGCGCCA AGGTGTTCCC GACCCCTCAC CACAACGGCA GCCAGATCGC CGCCCACAGC
GCATACTGGA AGAACGACAA CCCTGTGCGT CAGGACTTCG CCGCGATCAT CACCGGGCAC
GGCCACAAGG TCGTCGGCGG CACCGATGCC GATGTCCGTA TCCAGCCGGG GCCGTGGACG
AACGACGAGG GGGGCGAATG A
|
|---|
| Protein sequence | MVDYPALEGC EPGGFDRAAQ EAGELAQNVE SMIDELEALV PVLSGADDDF ATVNAIRDRV
AAETDRLREA QLSLRTIETS LLSLGEDVRR GRMELEEARR RADKFAKVDY SLGVITLDFG
KVPQADADPK GFARFKAQLR DVADQMRRAH TLANTSDYDA ASDIAKKSPA LTEPGPSRIR
SPYENHSWWT GRSAAEREHR IETEPNLVGG PDSDGIPSAA RSAANEQLLR QHIRELEERA
ASGSGAASRL LAVMLAVQHR LADDASDGTR ERAFLLLAEP SDPGRIVLAI GNPDIADHVI
VHIPGTGASL PKLAGEIARV ERMVGDANLY ETRHTAGILW LGYDAPPNLF AAATKRYAQS
ATKPLPRFLT GIRAVRRRGL DRFGVTVMGH SYGTVAIGFT VREQQVSASQ LILVASPGVG
VKSADQLKID KDDVYATTAP NDIIHRVPRV PHGTSPVHKS FGAKVFPTPH HNGSQIAAHS
AYWKNDNPVR QDFAAIITGH GHKVVGGTDA DVRIQPGPWT NDEGGE
|
|---|
| |