Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4663 |
Symbol | |
ID | 8885868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4971948 |
End bp | 4973132 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | uroporphyrin-III C-methyltransferase |
Protein accession | YP_003513399 |
Protein GI | 291302121 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.607311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00373911 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTATCCAC TTGGCCTGCG CCTCGACCGA CGGCGGGTAC TCGTCGTCGG CGCCGGAAAT CTCGCGCACC GGCGTGTACC CCGACTCCTC GACGCCGGAG CCGACGTGCT GCTCGTGTCG CCGCACGCCC GCGATTCGCT GCGGGCCATG GCATCGGAGC ACCGACTGCG CTGGGAGGAG CGACGGTTCC AGGCCAGCGA CCTGGACGGG GCCTGGCTGG TGCTGGCCGC CACCGACGAC CCGGCGGTCA ACGCCGAGAT CTCGGCGCTG GCCGAGGAAG CGCGGGTCTT CTGCGTCCGC GCCGACGACC GGGAGGCCGC CACGGCGTGG ACCCCAGCGG TCGGGCAGCA CGAGGAGCTG ACCTTCGCGG CCTTCGCGGG CGGGGACCCG CGTCGGGCGG CGGCGCTGCG GGACCGGCTG CTGGAACTGG CCGCGACCGG CGAGGTCAGC CCGCCCCGGT TCCGGGGCAG CGGAACGATT CCCGGGGTGG CGCTGGTGGG GGCCGGTCCC GGCGACCCCG ACCTGATCAC GGTCGCCGGA CGGGCGGCGC TGGCGCAGGC CGACGTCGTC ATCGCCGACC GGCTGGCTCC GGCGCGGCTG CTGGAGGAAC TGCGTGACGA GACCGAGCTC ATCGACGCGG CCAAGATTCC CTATGGGCGG CAACGGGAAC AGGACGAGAT CATCGCGCTG ATGCTCGAAC GCGCCAAGAA CGGCAAGTTC GTGGTGCGGC TCAAGGGCGG CGACGGCTTC GTGTTCGGAC GCGGCGGCGA GGAGCTGGAC GCCTGCGCGG CGGCGGGCAT CCCGGTGCGG GTGATCCCGG GCGTCACCAG CGCGATCGCC GGACCCGCGC TGGCGTCGAT CCCGGTGACC GAACGCGGCC TGGTGCACGA GTTCACCATC GTGAGTGGAC ACGTGGCGCC GGGCGACCCG ACGAGCCTCA CCAACTGGGA CGCGCTGGCC CGGCTACGCG GCACCGTCGT GGTGCTGATG GGGGTGCGGC ATCGCGGAGC GATCGCGGCA GCCCTCATCG CGGGTGGCCG CGACGCGGGC ACCCCGGCGG CGGTGGTGAT GGACGCATCG ACGCCCCGGC AACGCGAGGT GCGCACGACG CTGGCGGAGC TGGGCGACGT GGAGGTCACC TCACCGGCGG TCCTGGTGAT CGGCGAGGTG ACCCGGCAGC GCTAG
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Protein sequence | MYPLGLRLDR RRVLVVGAGN LAHRRVPRLL DAGADVLLVS PHARDSLRAM ASEHRLRWEE RRFQASDLDG AWLVLAATDD PAVNAEISAL AEEARVFCVR ADDREAATAW TPAVGQHEEL TFAAFAGGDP RRAAALRDRL LELAATGEVS PPRFRGSGTI PGVALVGAGP GDPDLITVAG RAALAQADVV IADRLAPARL LEELRDETEL IDAAKIPYGR QREQDEIIAL MLERAKNGKF VVRLKGGDGF VFGRGGEELD ACAAAGIPVR VIPGVTSAIA GPALASIPVT ERGLVHEFTI VSGHVAPGDP TSLTNWDALA RLRGTVVVLM GVRHRGAIAA ALIAGGRDAG TPAAVVMDAS TPRQREVRTT LAELGDVEVT SPAVLVIGEV TRQR
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