Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4600 |
Symbol | |
ID | 8885805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4910877 |
End bp | 4911791 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_003513337 |
Protein GI | 291302059 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.100956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACAGCGC AACCGCGCTG GTCTCGGCGC GATCTCTTCC GTGGCGGCTT GCTGGCCGGC GGTCTGGCCC TGGCACCCGG GTTGTTGACC GGCTGTTCGC TAGTCGGTGG AGATTCAATC AAGAAAATTG AGGCGGGCGA TCCGATAACA CTCGGAATGT CCAATGAGCC CCCGTTCGCG TATAAAGACG ACAACGGGAA AGTCATCGGC GAATCGGTGG CTATTTACAC TCATATTCTT AAGAAACTTG GCGCCGAGGA CGGCCAGATC GAAACCAAGA TTGTGGACTG GAATTCCCTG ATTCCGGGGC TGCGGGCCGA CGACTACGAC CTGATCTCGG CAGGGATGTT CATCAACAAG CTGCGCTGCG AGCGGGCGAT CTTCTCCGAA CCGGACTACA TCTGCAAGAC CGCGTTGCTG GTGAAGAAGG GAAACCCCCA CAACCTGAAG GACTTCGGTT CCTTCAAGAA GGGGGACAAC CGGGTGGGGC TGGTGACCGC CGGTGCCGAG CTGGCGCTGG CCGAGGCCGC CGGAGTGCCC AAGAAGAACA TGAAGCAGTT GCCGAACAAC AACGACCTGA AGAGTGCCCT GCACGCCGAT CAGATCGCGG CGATCGCGCT GACCTCCCCG GCCATGAACT ACATGGCCGA CACCAGCAAC GGAGCCTTCG AGACCGTCAA GCCGCCGTTC GGGCCCAAGG ACGAGAACGG CGAGGAACAG ATCGCCGGTG CCGGGGGAGC GGTGTTCCGC GACGACGACA CCAACTTCCG CGACGCCGTC AACGAGGAGC TGGCCAAGAT CAAGACCTCG GTGGACTCGT GGCTCAAGAT CACCGGTGAG TTCGGTTTCA CCAAGTACGA GTACCCGGAT CCCAAGAATC CGAAGTACAC CACCGCCGAA CTGTGCAAGG TTTAG
|
Protein sequence | MTAQPRWSRR DLFRGGLLAG GLALAPGLLT GCSLVGGDSI KKIEAGDPIT LGMSNEPPFA YKDDNGKVIG ESVAIYTHIL KKLGAEDGQI ETKIVDWNSL IPGLRADDYD LISAGMFINK LRCERAIFSE PDYICKTALL VKKGNPHNLK DFGSFKKGDN RVGLVTAGAE LALAEAAGVP KKNMKQLPNN NDLKSALHAD QIAAIALTSP AMNYMADTSN GAFETVKPPF GPKDENGEEQ IAGAGGAVFR DDDTNFRDAV NEELAKIKTS VDSWLKITGE FGFTKYEYPD PKNPKYTTAE LCKV
|
| |