| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4584 |
|---|
| Symbol | |
|---|
| ID | 8885789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 4893686 |
|---|
| End bp | 4896811 |
|---|
| Gene Length | 3126 bp |
|---|
| Protein Length | 1041 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_003513321 |
|---|
| Protein GI | 291302043 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.446149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.423836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGAAC CGAGGTACAC GGCCCGAGCG CTGGCGCGGC TTTTGGGCGA CGAGTATCCG
CCGACCGAGC AGCAGGCCAC CGCCATCGAG GCGCCGCTGC GACCGCAGCT GATCGTCGCC
GGTGCCGGTT CCGGCAAGAC CGGGACGATG GCCTCGCGGG TGGTGTGGCT GATCGCCAAC
GGTTACGCCC GCCCCGAACA GATCCTCGGG CTGACCTTCA CCCGCAAGGC CGCCGCCGAA
CTGGCGTCGC GGATCCGGGA ACGACTCGCG CGACTGTCGG GTCTGGACGG TGTCGGGCAG
CTGTCGGGCG AACCGACGGT GTCCACATAC CACTCCTACG CCTCCGGGAT CGTCAGCGAA
CACGGCCCCC GCATCGGGTT GGAACCCGGG ACCGTGCTGT CCCCGGCGCA GACCTGGCAG
CTGGCCTACG CGGCGGTGCG CGGCCACGAC GGCGACATGA GCGCGGTGAG CCTCACCGTC
GAGACCGTCG TGAAACGGGT GCTGTCGCTG TCGGACGAAC TGTCGGAGCA CCTGCGCGAA
CCCGAGGAGC TGGAGCAGTT CACCCAGGAG CTCGCCAACG AGATCGGCGA GCGGGTCGGC
AAGGGCACCC AGAAGACCGC GCAACTGTTG ATGGCGCTGC AATCGCGGCT GCAACTGCTG
CCGATCGTGG CCGACTACCG GCGCCGCAAG CGCGCCGAGG GCGCGGTGGA CTTCGCCGAC
CAGCTGCACT ACGCGGCTTC GGCCGCCGCG GCGGCCCCCG AGGTGGGCCG GGTGGAGCGG
GAACGGTTCG GCGTGGTGCT GCTGGACGAG TACCAGGACA CCTCGCACGC CCAGGTGGAG
CTGCTGAAGT CGCTGTTCGG CGGCGGGCAC CCGGTCACGG CCGTCGGCGA CCCGTGCCAG
TCGATCTACG CGTGGCGGGG CGCCAGCACC GGGACGCTGT CGCGGTTCCC CGGCGACTTC
CCGCACGCCG ACGGCACCGA GGCCGACCGG CTGGAGCTGA CCGCGTCGTG GCGCAACCGG
GCGTCCATTC TCACCGTCGC CAACACCGTT TCAGAACCGT TGCGCACCAT GGGTTTCCCG
GTTTCCCCAC TGGAACCCGG CGTGCCGGGC GAGGGAGAGG TCACCGCCGC CATGCTCAAC
ACCGCCGACG ACGAGGCCGA GTGGGTCGCC ACCCGGATCT ACCGGCTGTG GGCGGACAAC
GGCTTCGCGC CGGGCAGCCC GGTGGAGGGC ATGCCACCGA CCACGGCGGT GCTGGCGCGG
CGCCGCTCCC AGATCCCCCG GCTGGAGAAG GCGTTGCGCG CCAAGGGCCT GCCGGTGGAG
GTCATCGGCT TGGGCGGACT GCTGGACGCG CCCGAGGTGC GGGAACTGCA CTCGACGCTG
ACCGTGCTGG CCCGGCCGAC GGCGGGCCCG GCCTTCATGC GGCTGCTGAC CGGCCCCCGG
TGGCGGATCG GGCCGCGCGA CATCGCCGCC CTGCACGCCC GGGCCCGGGA ACTGGCGCCC
GAACGTCGCG GCTTCGAACC CAGCGCCGAG GGCCTCAACG AGGCCAGTCT CGCCGAGGCA
CTGGAGGACC TGGGCGACCT GCGCCGCTAC AGCGACGCCG CCGCCGAACG CTACACCGCG
CTGCGGGAAG AACTGGGGTA CCTGCGTTCC CGGCTGGACC AGCCGGTCAG CGACCTGATC
GCCGAGATCC TGAAGGTCTC GGGACTCGAC ATCGAGGTCG CGGTGCACCG AGGCGACTCC
GAACGGCTGG ACGCGTTCAT CGACGAGGCG GTCCGATACA CCTCGACGGC CTCACTGCCC
AGTCTGGACG GTTTCCTCTC CTATCTGGAC GCGGCCGAGG AACGGGAGCG CGGCCTGGAG
TTGACCGGCA CCACCGAGCA CACCGGAGCG GTGCAGATCC TCACCGTCCA CGCCGCCAAG
GGCCTGGAAT GGGACTGCGT GGCGGTTCCC GGCCTGGCCA AGGGGGTGCT GCCCGGCAAG
GTGATGGGCG GTTCCTGGCT GACCGACACC GGCAAACTCC CGTACCCGCT GCGCGGCGAC
GCCGCCGAGC TGCCGTACTT CCGGCTGGGC GGGGTCACCA AGGCCGCCGA ACTGTCGCGG
GCCGAGGCCG AGTTCAAAAA GGACGTCCAG TTCCACCACG AGGTCGAGGA GCGGCGACTG
GCCTATGTGG CCCTGACCCG GGCCCGCACC CACCTGTTCG CGTGCGGGTA CTGGTGGGAC
GACGGCGAGA GCGCCCGCGA ACCCTCGCCC TACCTCGACG AGACCGTCGC GGCCGGTGGC
CGGGTCGACG AGTGGATCGA GGACCCCGGC GAGGAGAACC CGCTGCTGGC CACCGAGTTG
AGCGCCGACT GGCCCGAGCC GGAACCCCTG GGCTCCAACC AGATCACGGT GGCGGCGGCG
GCCGGTGCCG TGCGGGCCTC CGACGGCGCC CTGGACGATT CCGCGCAGGC CAAACGCTGG
GCCGAGGAGG CCGAACTGCT GCTGGCCGAG CGCGCCGAGT CCGCGTCCGA CGGCATGGAG
GTGCCGGTGC CGTCGCAGTT GTCGGTGTCG CAGCTGGTGG CCTGGCACGC CGACGCGCAG
GAGTTCGCGG CCCGGTTGCG CCGTCCGGTG CCCGAGCCCC CGGCCCCGCA CACTCGGCGC
GGCACCGCCT TCCACGCGTG GGTGGAGAAA CGCTTCGACG GCGGCACCCT GTTCGACATG
GACGATCTGC CCGGGGCCGC CGACGGCGAA CCCGACACCG ACGCCGAACT GGCGGCGTTG
CAGGAGGCGT TCAACGCCTC GGAGTGGGCC TCGCGCACCC CGATCGCGGT CGAGGTGCCG
TTCGTGACCG TCCTGGAGGG AGTGGTGGTG CGAGGCCGCA TGGACGCGGT GTTCGCCACC
GACGACGGCG GTTACGAGAT CGTGGACTGG AAGACCGGAC GGCCGCCCCG CGGCCACGCG
GCCAAGGCCG CGGCGGTGCA GCTGGCCGCC TACCGGGAGG CCTGGGCGGT ACTGCGGGGC
GTCCACCGGT CCAAGGTGTC GGCGGCGTTC CACTATGTCC GGCAGAACGT CACCGTCCGG
CCGAGCGGCC TGCCGCTGCT GGAACAGCTG GCCGCACCGC TGGGACCCAC GCCGCCGCAA
GAGTAA
|
|---|
| Protein sequence | MTEPRYTARA LARLLGDEYP PTEQQATAIE APLRPQLIVA GAGSGKTGTM ASRVVWLIAN
GYARPEQILG LTFTRKAAAE LASRIRERLA RLSGLDGVGQ LSGEPTVSTY HSYASGIVSE
HGPRIGLEPG TVLSPAQTWQ LAYAAVRGHD GDMSAVSLTV ETVVKRVLSL SDELSEHLRE
PEELEQFTQE LANEIGERVG KGTQKTAQLL MALQSRLQLL PIVADYRRRK RAEGAVDFAD
QLHYAASAAA AAPEVGRVER ERFGVVLLDE YQDTSHAQVE LLKSLFGGGH PVTAVGDPCQ
SIYAWRGAST GTLSRFPGDF PHADGTEADR LELTASWRNR ASILTVANTV SEPLRTMGFP
VSPLEPGVPG EGEVTAAMLN TADDEAEWVA TRIYRLWADN GFAPGSPVEG MPPTTAVLAR
RRSQIPRLEK ALRAKGLPVE VIGLGGLLDA PEVRELHSTL TVLARPTAGP AFMRLLTGPR
WRIGPRDIAA LHARARELAP ERRGFEPSAE GLNEASLAEA LEDLGDLRRY SDAAAERYTA
LREELGYLRS RLDQPVSDLI AEILKVSGLD IEVAVHRGDS ERLDAFIDEA VRYTSTASLP
SLDGFLSYLD AAEERERGLE LTGTTEHTGA VQILTVHAAK GLEWDCVAVP GLAKGVLPGK
VMGGSWLTDT GKLPYPLRGD AAELPYFRLG GVTKAAELSR AEAEFKKDVQ FHHEVEERRL
AYVALTRART HLFACGYWWD DGESAREPSP YLDETVAAGG RVDEWIEDPG EENPLLATEL
SADWPEPEPL GSNQITVAAA AGAVRASDGA LDDSAQAKRW AEEAELLLAE RAESASDGME
VPVPSQLSVS QLVAWHADAQ EFAARLRRPV PEPPAPHTRR GTAFHAWVEK RFDGGTLFDM
DDLPGAADGE PDTDAELAAL QEAFNASEWA SRTPIAVEVP FVTVLEGVVV RGRMDAVFAT
DDGGYEIVDW KTGRPPRGHA AKAAAVQLAA YREAWAVLRG VHRSKVSAAF HYVRQNVTVR
PSGLPLLEQL AAPLGPTPPQ E
|
|---|
| |