| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4325 |
|---|
| Symbol | |
|---|
| ID | 8885526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4616305 |
|---|
| End bp | 4616862 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003513065 |
|---|
| Protein GI | 291301787 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.670247 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCGTC GTGAAATCGC GGTAGCCGCC CTGCGGCTGC TCAACGCCAA ACCCACGGCG
TCCATGGCCG ACATCGCCGC CGCCGCCGGA GTCAGCCGCG CCACCCTGCA CCGCCACTTC
GCCGGACGCG AGGAACTCGT CCGCCTGCTC GGTGAACTGA GCATCGAATC CTGGCGCGAG
GCCCTGGACA ACGCCGACAT CGACACGGCC ACCGCCAGCG GCGACGCCGC CCAACTGCGC
TCCGCCCTGG AAGTCCTGTG CGGCCAACTG GTGCGCGACG CCTACGAACA CGGCTTCGCC
CTCACCGAAC CCTCCTTCGA GACCGACGAC GAGATGGTCG CCGCCAGCGA GGTCCAGCAG
AACCGCGAAC TGGCCTTCTA CGCCGCCGCC CAGAAAGCGG GCGTGGTGCG CGACGACATG
TCGGCCACCT GGATCGCCCA CGCCGTGTTC GGCCTCCTGG TCGGCCTGCG CGAAGCCCTG
CGCCGCGGCG ACATCGCCGT GCGCGACGCC GAACGACTGC TGCGCGAGAC CGTCTTCGGC
GGCATCGCCG TCCACTGA
|
|---|
| Protein sequence | MGRREIAVAA LRLLNAKPTA SMADIAAAAG VSRATLHRHF AGREELVRLL GELSIESWRE
ALDNADIDTA TASGDAAQLR SALEVLCGQL VRDAYEHGFA LTEPSFETDD EMVAASEVQQ
NRELAFYAAA QKAGVVRDDM SATWIAHAVF GLLVGLREAL RRGDIAVRDA ERLLRETVFG
GIAVH
|
|---|
| |