Gene Snas_4175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4175 
Symbol 
ID8885376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4471698 
End bp4472540 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512919 
Protein GI291301641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.516461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.259895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCGG TGTACAAGAA CGCGCAGGGC CGCGACACGA TCCAGCGGTG GTGCCGGGAC 
CGGCTGGCCG CGTGGAGCGT GCCGCACGAA GCGACCACGG TCGCCACCAG CTGCGGCGAC
ACCCACGTCC TGTCGGTCGG GGAGGCCGAC AGCACCGTCG TGTTCGTACC GGGCACCACC
ATGAACGCCG CGGCCTGCCT GCCGTGGATC GAGGCGCTGT CACAGCGGCA CCGGGTGTTG
ACAGTGGACG TACCCGGGCA GCCGGGTCTC AGCGCCGACG AGCGGCCCCG CCGGGGCCGG
TCGGCCTGGT ACGCCCAGAT GCTCGCCGAG GTCCTGGACG CGACTGTGGA CACCGCGATC
GTGGTCGGCA ACTCGCTGGG AGCCGCCATC GCGCTGGCCT GCGACTCGCC CCGCATCAGC
GGACGGGTGC TGGTGTCGCC GGGCGGCGTC ATCCGGCTGG CGGTGAGTCC GTCGCTCATG
TGGCGCTCGA CCGCGTGGCT GCTGGCGCCG GGCCCGCGAA CCACCACCCG ACTGCTGGAG
CGGTTCCTGG CGCCCGGACA GACACCGCCA CCGACCGAAG TGGAGTGGAT GACGCTGGTG
GCCCGGTACT GCCGCTCCAC ACTGGCGCCG CCACCGTTGC CGAGCCGGCT GCTGGCCGAC
CGGGCGAGGA CACCGTGCCT GGTGTCGGTC GGCGAGTTCG ACAGGTTCCT GTCCCCGGCG
CGGCTCGCGA AGCCCGTGGC GGCGCGGCTG GGGGTCGAGC TTCGCGTCTG GCCCGGCCTG
GGGCATCTGA CCACACCCGA CCGGGTGTTC GAGGTCGCCG AACTCGTCGA CGAACTGGTC
TAA
 
Protein sequence
MTSVYKNAQG RDTIQRWCRD RLAAWSVPHE ATTVATSCGD THVLSVGEAD STVVFVPGTT 
MNAAACLPWI EALSQRHRVL TVDVPGQPGL SADERPRRGR SAWYAQMLAE VLDATVDTAI
VVGNSLGAAI ALACDSPRIS GRVLVSPGGV IRLAVSPSLM WRSTAWLLAP GPRTTTRLLE
RFLAPGQTPP PTEVEWMTLV ARYCRSTLAP PPLPSRLLAD RARTPCLVSV GEFDRFLSPA
RLAKPVAARL GVELRVWPGL GHLTTPDRVF EVAELVDELV