Gene Snas_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4116 
Symbol 
ID8885317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4387029 
End bp4387955 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content72% 
IMG OID 
Product2-dehydropantoate 2-reductase 
Protein accessionYP_003512860 
Protein GI291301582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.605632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACTC TCATCGTCGG CGCCGGAGCC GTCGGCGGCT ACTTCGGATC CCGACTGGTT 
CACAGCGGTC AGGACGTGAC GTTCCTGGTG CGCCCGCGCC GCGCGGAACT GTTGCGGCGG
CGCGGTCTGC GGGTCACCGG CCTCGGCGAG GACACCGTCG TCGAGCCACG GCTGGTGACC
GCGCCCGAAC TGACCGGCGA CTACGACGCG ATCCTGTTGG CGGTCAAGGC GACCGGATTC
GAGCAGGCCC TCGCCGACGT CGCGCCCGCC GTCGGCGACG ACACCGCGAT CCTGCCGCTG
CTCAACGGCA TGGCGCACCT GGACCGGCTC AACGAACGCT TCGGCCCGGC CCGGGTACTG
GGCGGCGTCG CGAAGGTCAT GACCACCGTC GACGACGAGG GCGACATCGT CCGGCTGGGA
CCGCTGGAGC ACATCCTGCT GGGGGAGCAG GACGGGCGGC CGTCGAGCCG CGTCGACGAC
ATCCACGCGA CGCTGACCAA GGCCGGCATC CCCAGTGACA CCAGCACCGC CGTCCTCGGT
GCCATGTGGA GCAAGTGGGT GTTCATCTCC GCGCTGGGGG CCGTGACCAC CCTGCTGGAC
GGGACGGTCG GCGAGGCCAA CTCGGTGCCC GGCGGCACCG CCGTGGCCGC CGCGATCACG
CGTGAGGCCG CGGCGATCGC CGAGCGTTCG GGTTTCGGCC TGTCCGAAGC GGCGTTGACC
GCTGTCCTGT CGACGACCAC CGACCCGGAC TCGCCGGTCA CGCCGTCGCT GTACCGCGAC
CTGACCTCCG GGCTTCCCAC CGAAGTGGAG CACCTGTTCG GCGACCTGAT CGCCCGAGCC
CGCGACCTGG GCGTCGACAC GCCGCTGCTG GACGCCGCGA CCGCCCGGCT GCGGGTCCAC
GAGCGGCGAC TCGCCGCCGG TTCCTGA
 
Protein sequence
MRTLIVGAGA VGGYFGSRLV HSGQDVTFLV RPRRAELLRR RGLRVTGLGE DTVVEPRLVT 
APELTGDYDA ILLAVKATGF EQALADVAPA VGDDTAILPL LNGMAHLDRL NERFGPARVL
GGVAKVMTTV DDEGDIVRLG PLEHILLGEQ DGRPSSRVDD IHATLTKAGI PSDTSTAVLG
AMWSKWVFIS ALGAVTTLLD GTVGEANSVP GGTAVAAAIT REAAAIAERS GFGLSEAALT
AVLSTTTDPD SPVTPSLYRD LTSGLPTEVE HLFGDLIARA RDLGVDTPLL DAATARLRVH
ERRLAAGS