Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3972 |
Symbol | |
ID | 8885173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4236915 |
End bp | 4239440 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_003512717 |
Protein GI | 291301439 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.120133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGTGCG GTTCGGGACT GCCCGACACT GTCGAGGTGC TGCTTCCCGA ACCCGCGACC GTGCCCGGCG GTGACCTGCC GGTCCGCCAC GTTCTGCCGG AACTTCGCGA AGCCTTGGAC GGCAACGGTC GCGCCGTGCT GGTCGCGCCG CCGGGCTCCG GCAAGACCAC GCTGGTTCCG TTGGCGCTCG CCGATCACCT GGACGGGCGC GTCATCGTCG CCGAGCCCCG GCGGGTCGCG GTGCGGGCCG CCGCCCGACG GATGGCCGCG CTGAGCGGCA CCCGGCTCGG CGAGGAGATC GGCTACACCG TGCGCGGCGA CCGCAAGACC TCGGCGCGCA CCCGCGTCGA GGTCGTGACC ACGGGCGTCC TGGTGCAGCG GCTGCACCGC GACCCGGAAC TGCCCGGCGT CGCCGCGATC GTCGTCGACG AATGCCACGA ACGCCACCTC GACACCGACC TGGCGCTCGG TTTCGCCGTC GACGTGCGCG CCAACCTGCG CGACGATCTG CGGCTGCTGG CGACGTCGGC GACCGCGCGC GCCGAGAAAC TCGCCTCGTT CATGGGCACG GCCACACCCA TCGTCACCGC CACCGCCTCG CCGCACCCGA TCACCACCGT GTGGGCACCA CCGGCCCGAC CCGTGTCACC GCCGCACGGC CTGTGGGTCG ACCCGAAGCT GCTCGACCAC GTCGCCGCCA CCGTCCACAA GGCTCTCGCC GAGCGCGAGG GCGACGTCCT GGTGTTCCTG CCCGGAGCCG GGGAGATCGA CAAGGTCGCC GCACGCCTGT CCACTGTGCC CGACGTCGAC GTCCTCACCC TGCACGGCCG CCAGGACTCC CGCCAACAGG ACGCCGCGCT CCAGCCCGGC GCGCGGCGGC GGGTGGTGCT GGCCAGCGCC GTCGCCGAAT CCAGCCTCAC CGTTCCCGGC GTGCGCGTCG TCGTCGACGC CGGACTGTCG CGCGAACCCC GCGTCGACCA CGCCCGGGGA CTGCCGAGCC TGGTGACCGT GCGGGTGTCG CGGGACTCGG CCACCCAGCG CGCCGGTCGA GCCGCCCGCG AGGCGCCCGG CACCGTCTAC CGCTGCTGGC CCGAGTTCGA GCACGACCGG CTGCCCGCCT ACCCGCGGCC CGAGATCGCC ACCGCCGACC TGACCGCGTT CATCCTGCAC CTGGCGCGGT GGGGCGGCGA GGTTCCGCTG CTGGACCGTC CGGCCGACTC CGCCACCGAA ACCGCCATGT CCACATTGCG CACGCTCGGT GCGGTGGACG GCACCGGCAC CATAACCCAG CGCGGCGAAG CGTTGGCGGC CATCGGCACC CATCCGCGAC TGGCCCGCGC GCTGCTGGAC GGTGCCGACT CCATCGGGGC CCGGCAGTCC TGCGAGGTCG TCGCGCTGCT GTCGGCCGAC ACGTCACCGT CCACGGACGA CCTCGCCGCC GAACTGCGCG CACTGCGGCA ACGCCGCGAC CGCGCCTGGC AGACCGAGAC CCGCCGCCTC GAATCCAGCC TCCCCAAACG CCTGGCCGAC GCCACCCGGC CAGCCGCCCC ACGCTCAGCC GACCAGGCCG CCGCCCTCAT CGTCGGGCTG GCCTTCCCGG AACGGTTGGC CCGCCGCACC ACCCCCGACG GTCGCGTCTA CCTCATGACC GGCGGCACCC AGGCCGAGCT CGCGCCGGGC TCCCGAGTCT CCGGAGTGGA ATGGCTCGCC ATCGCCAGCG CCGACCGGCA GCCCGGCCGG GCCGCCGCCC GGGTCCGGCT GGCCGCCCCC TGCGACCCCG AGACCGCTCT GGCCGCCGCC GCGCCGCTGC TCACCGAAAC CCGCGACATC GCCTGGCGCG ACGGCGATGT CCGGGCCCAC CGCCGCGAAA GCCTCGGCGC GATCACCCTC GTCGAACGCC CACTCACCCC CAAGCCCGAC GAAGCCAGCG CCGCTCTGCG CGACGGACTG CGCGCCGAAG GCCTCAACCT GCTGCGCCCC AGCCGCGAAG CCGAAACCCT GCGCTCCCGG CTCGCGTTCT GCCGCCACGT CTTCGGGGAC CCATGGCCCG ATGTGGACGA CGCCGCGCTG CTGCTGCGCC TCGACGACTG GCTCGGCCCC GAACTGGCCA AGGCCCGCCG CCGCGCCGAC CTGGAACGCG CCGACGTCGC CAGCGCGCTG CGGCGGCTGC TGCCGTGGGA ACAGGCCGCC GCCCTCGACC GGGTCGCTCC GTCCCGCGTC ACCGTCCCCA GTGGCTCCAA GCTCGCCGTC GACTACACCG ACCCGACCGC CCCGAAGCTC GCGGGCAAAC TGCAGGAGTT CTTCGGCTGG ACCACCACCC CCACGATCGC CGACGGCCGC GCCAAGCTCG TCGTGCACCT GCTGTCACCC GCTGGCCGTC CCGCCGCCGT CACCGGTGAC CTGGAATCGT TCTGGCGCAC CGGCTACCCG CAGGTTCGCG CCGAGCTGCG CGGCCGCTAC CCCAAACACC CGTGGCCCGA GGACCCCACC ACCGCCGAGG CCACCAGCCG CGTCAAACGC CGCTGA
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Protein sequence | MPCGSGLPDT VEVLLPEPAT VPGGDLPVRH VLPELREALD GNGRAVLVAP PGSGKTTLVP LALADHLDGR VIVAEPRRVA VRAAARRMAA LSGTRLGEEI GYTVRGDRKT SARTRVEVVT TGVLVQRLHR DPELPGVAAI VVDECHERHL DTDLALGFAV DVRANLRDDL RLLATSATAR AEKLASFMGT ATPIVTATAS PHPITTVWAP PARPVSPPHG LWVDPKLLDH VAATVHKALA EREGDVLVFL PGAGEIDKVA ARLSTVPDVD VLTLHGRQDS RQQDAALQPG ARRRVVLASA VAESSLTVPG VRVVVDAGLS REPRVDHARG LPSLVTVRVS RDSATQRAGR AAREAPGTVY RCWPEFEHDR LPAYPRPEIA TADLTAFILH LARWGGEVPL LDRPADSATE TAMSTLRTLG AVDGTGTITQ RGEALAAIGT HPRLARALLD GADSIGARQS CEVVALLSAD TSPSTDDLAA ELRALRQRRD RAWQTETRRL ESSLPKRLAD ATRPAAPRSA DQAAALIVGL AFPERLARRT TPDGRVYLMT GGTQAELAPG SRVSGVEWLA IASADRQPGR AAARVRLAAP CDPETALAAA APLLTETRDI AWRDGDVRAH RRESLGAITL VERPLTPKPD EASAALRDGL RAEGLNLLRP SREAETLRSR LAFCRHVFGD PWPDVDDAAL LLRLDDWLGP ELAKARRRAD LERADVASAL RRLLPWEQAA ALDRVAPSRV TVPSGSKLAV DYTDPTAPKL AGKLQEFFGW TTTPTIADGR AKLVVHLLSP AGRPAAVTGD LESFWRTGYP QVRAELRGRY PKHPWPEDPT TAEATSRVKR R
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