Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3738 |
Symbol | |
ID | 8884937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3984148 |
End bp | 3985977 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | von Willebrand factor type A |
Protein accession | YP_003512488 |
Protein GI | 291301210 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.105397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGTG GCCGCAGCCA ATCGGGTGTC GTTAGGTCGC ATCGGCGCGG TCGCCGCAGG CAGGTCATCC GCCGCCGTCT GCCCGTCGCT CCGTGGATCG TCGTGACCAC CGTCGTCGCG CTGGCCGCCA GCGGCCTGGT CGGCGGCTAC GCGTTCCTGC TGAGCACCGG TTGCAGCGGC GACCCGATCA AGGCGGTCGT GGCGGCCCCC AAGGAGATCA GCGGAACCCT CCAGACCGCC GCGCGCTCCT GGGCCGGTAC CGAGCCGTCG GTGGACGGGG GACAGTGCAT CAGCGTGGAA GTGCGCGAGC AGGCCTCCCA GGACGTCGTG TCGGCGCTGT CGGGCTCCAG CACGGGCTCC AAGAAGGATC TGCCGCACGT GTGGATCCCG GAGTCGATGG CGTGGCTGGA GATGGCCAAG ATCTCCGACC GTGGCAAGAA GATGCTGCCG GACTCGCCGC CGCTGGTCGC GACCAGTCCG ACCGTGATCG CGATGCCCAC CGAGGCCGCC AAGGCCCTGG GCTGGCGCAA CGAGGACAAA CCGGTCGACA AGGCCGGTAA ACCCACCTGG GGCAACCTGC TGAAACTGGC CGAGGACTCC GATTGGAGCC AGTTCGGCAA GGACAAGTGG GGCGACATCA CCGTCGGCAT GAGCGACCCG ATGGCCTCCA CCGCCGACCT GCACGCGCTG TTGAGCATCG TGGACAAGAA CCGCAGCGCC GGTGTCGACG CCGAGGAACT GGGCAACGTC TCCAAACTGA AAAGCACCGT CCACAAGGAG ACCCCCAGCG TCGAGGAGAT GATGGGCAAG GTCTCCGAGG CGAAGGCGAA GGGTGACCCG GTCGGCTTCG TGTCGGCGTT CCCGGCGCTG GAGCGCGACG TCTGGAAGAA CAACTTCTCC GGTACCGAAT CGCCGTTGAC GGCGGTGTAC CCGGCAGACG GCAGCCTCGA CGCCGACTAC CCGCTGGCGG TGCTGCAGAA CGTGTCCTGG ACCGACGCGA CCCACCAGGA GATCGGGAAG CAGTTCGGCG AGTACCTGCT CGGTGAAGGC CAGAAGGAGA TCAAGAAGGG CGGCTTCCGC GACGGCACCC GTCGCGAGGC CAGCAGCGAA CTGACCGGTA CCGAGGGCCT GGCCACCCAG ATCACCGCGA CGCAACGCGA CAAGGTCGAC TCCGAGAGTG TCCAGACCAC GCTGGCGACC TGGCAGGCGG TGGCCCGTCC GGCCAACGTC CTGGTCGTGG TCGACTCCTC GTCGTCGATG AGCACCGAGG AACCCTACGA CGGCGAGAAA CTGTCGCGTA TGGACATCAT TCGCAAGTCG CTGGAGAGAT CGCTGGACCT GTTCGGCGAA CAGGCCAATG TGGGCCTGTG GCGATATCCG TACGACGATC CGGTCGCCGG TACGGCGTAC CAGAAACTGG TGGAGATCGG TGAGTTCGAC AAGTCGCGGC AGGATGACAT CGAATCGCAG CTCAGTGCCG TGGAACCGGC CGCGGACGGC GGCCTCAACG ACACCGTCGT GGAGGCGTAC AAGAACGTCC TGGACAACTA CAACAAGACC ACCGGGGCGA TCAACCTGGT GGTGGTGATA TCCGACGGCG GCAGCGAGTC GGACGCCAGT CTGAGTAATG AGGACGTCAC GGAGGAACTG AAGGACCTGT CGGCCAAGGA CCGTGACAAG GAAGCCTCGA TCATGACGAT CGGTTACGGC AAGGACGCCG ACAAGGATCA CCTGGACGCG ATCGCGACGG CCACGCAGGG TCGCTACTAC CCGGCGAAGT GGAACGACGA GATCAACATG CAGATCCTCA ACGCGCTGTA CTACAACTGA
|
Protein sequence | MARGRSQSGV VRSHRRGRRR QVIRRRLPVA PWIVVTTVVA LAASGLVGGY AFLLSTGCSG DPIKAVVAAP KEISGTLQTA ARSWAGTEPS VDGGQCISVE VREQASQDVV SALSGSSTGS KKDLPHVWIP ESMAWLEMAK ISDRGKKMLP DSPPLVATSP TVIAMPTEAA KALGWRNEDK PVDKAGKPTW GNLLKLAEDS DWSQFGKDKW GDITVGMSDP MASTADLHAL LSIVDKNRSA GVDAEELGNV SKLKSTVHKE TPSVEEMMGK VSEAKAKGDP VGFVSAFPAL ERDVWKNNFS GTESPLTAVY PADGSLDADY PLAVLQNVSW TDATHQEIGK QFGEYLLGEG QKEIKKGGFR DGTRREASSE LTGTEGLATQ ITATQRDKVD SESVQTTLAT WQAVARPANV LVVVDSSSSM STEEPYDGEK LSRMDIIRKS LERSLDLFGE QANVGLWRYP YDDPVAGTAY QKLVEIGEFD KSRQDDIESQ LSAVEPAADG GLNDTVVEAY KNVLDNYNKT TGAINLVVVI SDGGSESDAS LSNEDVTEEL KDLSAKDRDK EASIMTIGYG KDADKDHLDA IATATQGRYY PAKWNDEINM QILNALYYN
|
| |