Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3658 |
Symbol | |
ID | 8884857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3889555 |
End bp | 3890445 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | UspA domain-containing protein |
Protein accession | YP_003512409 |
Protein GI | 291301131 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0641627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAGCCG CGATAGCCGT CGGATACGAC GGATCCCCAT CCAGTCGCCG CGCCATCGAC TGGGCGGCCG ACGAAGCGCG CCTTCGCGAT CGCGAGTTGA TCATCGTCAC CGTCCACTTG ACACTTAGCG CGCCGCCACC GCCCGCTGAG GACGAACCCG ATCCCAGCGC CGACCGGCAG GCCGTTCGGG ACATGCTGAA CGCGGCGAAG CGCGATCTGG CCGAGCGGTC ACCGCGGTTG AAGGTGGAGG CCGAACTGAT CAGTGCCGCC ACCGCCGGCG CGGGCCTGGT CGCCGGTTCC GATCGGTGGG AGTTGCTCGT GCTGGGTGAG CGCGGCGAAG GCGGCTTCGC CGGAATCCTC GTGGGCTCCA CCTCCACCCA GGTCAGCGCC CACGCGCGGT GTCCGGTCGT GGTGGTGCGG GGCCCTGGCG GCGAAACCGG CCCCAACGCC GGTCGCGTGG TCATCGGCGT CGACGAATCC GAACACTCCC GCGAGGCCGT GCGCTTCGGT TTGCGGGAGG CGCGGCTGTA CCAGGTACCG GCCACGCTCG TTCACGCGTG GCGACACCCG ATGGCGACAC GGGACGGATA CCTCGCCAGC GGCCTGGGTG ACCGACAGGC CATGGCGGAT CGGGCATTGA CGACCATCAG TGAAGCCCTC AGCGGGATCC ACGAGGACTT CCCCGACGTG CCGGTCAAAC GGATGGCGGT CCACGGCGGT GCCCGGCAGG TGCTGCTGGA CCAGTCGATG GGGGCTCGCA TGCTCGTGGT GGGTTCGCGC GGGCACGGTG GTTTCGCCGG GCTGCTGCTC GGTTCCACCA GTCAGGCACT GCTGCACCAC GCCGACGCGC CGGTCGCGAT CGTCCGTTCC GCGCGGCCGA CGACGCCGTG A
|
Protein sequence | MPAAIAVGYD GSPSSRRAID WAADEARLRD RELIIVTVHL TLSAPPPPAE DEPDPSADRQ AVRDMLNAAK RDLAERSPRL KVEAELISAA TAGAGLVAGS DRWELLVLGE RGEGGFAGIL VGSTSTQVSA HARCPVVVVR GPGGETGPNA GRVVIGVDES EHSREAVRFG LREARLYQVP ATLVHAWRHP MATRDGYLAS GLGDRQAMAD RALTTISEAL SGIHEDFPDV PVKRMAVHGG ARQVLLDQSM GARMLVVGSR GHGGFAGLLL GSTSQALLHH ADAPVAIVRS ARPTTP
|
| |