Gene Snas_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3542 
Symbol 
ID8884741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3752366 
End bp3752839 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512297 
Protein GI291301019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.325273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCATG CCGAGGCCTT CAAACGCGCC AGCGATGGCT TCGCCGCCCG GATCCGCGCC 
GTGCGCCCGG ACCGGTGGCA CTCACCAAGC CCGTGCGCGC CGTGGACCGC CCGTGACGTG
GTCGCCCACG TCATCAACGA GCAGCGCCGC ATGCTGAGCA CCGTCCGCGG CGTCGACCCC
GAACCGGTGC ACGGCGTCGG GATCGCCGAG ATGGGAACCA TCCCCGAACT GGCCGCCGAC
GCCGATCTCG CGGCGGCCTG GGACCAGGTG GGCTCCGGCC ACACCTGGGA TCTGGCCCGG
GCCACCGGCG GCGACGAACG GCTGGATCCC GACGTGGTTC GCCAAGTGCA CGAGGCGCTC
AAGCCGCTGG AGGAGTTCTT CCGCCAGCCG TGGGCGTTCG GTCCGAAGGT GGACGCGCCG
CCGGGAGCCG ACGCCCAAAC CGAGTTCCTG TGCTTCGTGG GCCGCAAGCC GTGA
 
Protein sequence
MDHAEAFKRA SDGFAARIRA VRPDRWHSPS PCAPWTARDV VAHVINEQRR MLSTVRGVDP 
EPVHGVGIAE MGTIPELAAD ADLAAAWDQV GSGHTWDLAR ATGGDERLDP DVVRQVHEAL
KPLEEFFRQP WAFGPKVDAP PGADAQTEFL CFVGRKP