Gene Snas_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3479 
Symbol 
ID8884678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3678673 
End bp3679017 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003512235 
Protein GI291300957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CACTCCGGGA ACCCACGTTC CTGATACTCA CCGCGCTCGC ACGAGAGCCA 
TTGCACGGCT ACGGAATCAT CACCGAGGTC GCGACGCTCT CGCAAGGCCG CGTAGGCCTG
CGCCCCGGCA CGCTGTATGG CGCGCTGGAC CGGCTTCGCG AGGATGGCCT GGTCGCCCCC
GACCACGAGG AGATCGTGGA CGGCCGACTG CGGCGCTACT ACCGACTCAC CGAGGACGGC
GCATCCACAT TGCAGGAAGC GGCGGAACGA CTGCAGAGTC ACGCCGAAAC CGCCACCCAG
CGCCTACACC ACCGCAAACC CCGCCTGGCA GGAGGAATGG CTTGA
 
Protein sequence
MTDALREPTF LILTALAREP LHGYGIITEV ATLSQGRVGL RPGTLYGALD RLREDGLVAP 
DHEEIVDGRL RRYYRLTEDG ASTLQEAAER LQSHAETATQ RLHHRKPRLA GGMA