Gene Snas_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3356 
Symbol 
ID8884555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3557449 
End bp3557901 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003512114 
Protein GI291300836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0369377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTCA CACTCGCCAC TGGGGGTACC TGGACCGACG CGGCCTGTCC GGTGGCGCGG 
ACCACCGATC TGGTCGGTGA TCGGTGGAGT CTGTTGATCA TCCGGGACGC GATGGACGGG
GCGTCGACGT TCACGGACTT CCAGCGGGGC CTGGGGATCG CCCGCAATAT CCTCACCGAC
CGGCTGCGCA AGCTCGTCGA GCACGGCATC CTCGACAAGT CGGACGCGGC GGACGGACGG
CGCTACAACT ACCGGCTCAC CGAAGCGGGG CGCGACCTGT TCACCGTCGT GGTCGCCCTG
CGGCAGTGGG GTGAGCGGCA CGCGTTCGCC GCTGACGAGC CGCACTCGAC GCTCGTCGAC
GGGCAGGAGC GGGAACTGTC CGAACTGCGC GCGCTCAACC GGGACGGGCA GCCGGTCACC
GTCGAGAGCT CGCGCGTTCG CAAGCTCGAC TGA
 
Protein sequence
MDVTLATGGT WTDAACPVAR TTDLVGDRWS LLIIRDAMDG ASTFTDFQRG LGIARNILTD 
RLRKLVEHGI LDKSDAADGR RYNYRLTEAG RDLFTVVVAL RQWGERHAFA ADEPHSTLVD
GQERELSELR ALNRDGQPVT VESSRVRKLD