Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3356 |
Symbol | |
ID | 8884555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3557449 |
End bp | 3557901 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003512114 |
Protein GI | 291300836 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0369377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGTCA CACTCGCCAC TGGGGGTACC TGGACCGACG CGGCCTGTCC GGTGGCGCGG ACCACCGATC TGGTCGGTGA TCGGTGGAGT CTGTTGATCA TCCGGGACGC GATGGACGGG GCGTCGACGT TCACGGACTT CCAGCGGGGC CTGGGGATCG CCCGCAATAT CCTCACCGAC CGGCTGCGCA AGCTCGTCGA GCACGGCATC CTCGACAAGT CGGACGCGGC GGACGGACGG CGCTACAACT ACCGGCTCAC CGAAGCGGGG CGCGACCTGT TCACCGTCGT GGTCGCCCTG CGGCAGTGGG GTGAGCGGCA CGCGTTCGCC GCTGACGAGC CGCACTCGAC GCTCGTCGAC GGGCAGGAGC GGGAACTGTC CGAACTGCGC GCGCTCAACC GGGACGGGCA GCCGGTCACC GTCGAGAGCT CGCGCGTTCG CAAGCTCGAC TGA
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Protein sequence | MDVTLATGGT WTDAACPVAR TTDLVGDRWS LLIIRDAMDG ASTFTDFQRG LGIARNILTD RLRKLVEHGI LDKSDAADGR RYNYRLTEAG RDLFTVVVAL RQWGERHAFA ADEPHSTLVD GQERELSELR ALNRDGQPVT VESSRVRKLD
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