Gene Snas_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3352 
Symbol 
ID8884551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3552144 
End bp3553394 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content65% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003512111 
Protein GI291300833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.237036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAAC GCCTACTCAT CGTCGCCGGA CTGGCGGCCG TGATGGCTGC CGGTTCCGCG 
GTCGCCATCG CTGACCCTTT CGACTCCGAA CGCCCAAACT CCGGTATGGA CAGTGACTTG
CTGGACAGCA AGCTCAAAGC CCTACAGGAA GCGGGCGCCC CGGCGGTGAT CGCGGAGGTC
CGCGACGGCG ACGGTGTCTG GGAAGGCGCC GCCGGTGAAC GGGTACTCGG AGAGAACACG
CCACCCGAAC CCACCGACCG GGTGCGGGCC TCCAGCGTCG CACTCAGCAT GATCGCCACC
GTCGCTCTGC AACTGGCTGA TGAGGGCGAA CTCGACCTCG ACGCCCCCAT CGACGAATAC
CTGCCCGACG TGTTGCCCTA CGAGGACACC ATCACCACGC GGCAAATGCT CAACCACACC
AGCGGCGTGC CGGACTATTT CGTCCACATC TACGGATCAC TGCACCAGGG CGACCCCACC
GACGTGCGCG ACAACCGGCT GAACGAGTAC ACGCCCGAAG AACTCATCGC GATGGCCACC
GAGAAACCGC TGGACTTCGA ACCCGGCAGC AAGTTCGCCT ACTCCAACAC CGGTTACACC
GTGATCGGCC TGCTGATCGA GGACCTCACC GGCAAATCCA TAGAGGACGC CATCGGCGAG
CGAGTACTGG ACCCGGCGGG ACTCGACGAC ACCTACATGA TGGCTCGCGA CGGCGAGCTC
GTCGTGGAAG GCCCGCACCC CAACGGTTAC TTCGACGCCG GTGACGGCAA GGAAATGATC
GATGTCTCCG AACTCCACCC GTCGCAGTTT TGGGCGGGCG TGGCCGCCGT GTCCAACCCG
CGCGACATCA ACCGCTTCTA CAAGGCCATG TCCGACGGAA CCCTGCTGAG CCCCGAACGG
CTCGCCGAGG CCCGCGAGCT CAGCCCGCAG TCGGAGAAAA CCTACGGTCT GGGCCTGCAA
GCCTTCGTCA AACTCCCCGA CAACTGTGCC CCGATCCCCG ACCGCATCGC CTACGGGCAC
GGCGGCGACG GAATGGGCTA CCTCACCTGG ACCGCGCACT CCCCGGACGC CAACCGCCAG
GTGACGTTCA CCTTCACCCT CGGCTACGAA CTCAACCCCA CCGAGGAACT CAACAAGGCA
TGGCGCGGCC TGCTCTACGC CGGACTGTGC GACGTGGACA TCAACGATCC CGCCGTGTCC
AAGACCCTCC CGGATCAGTC CCCGATGACC CTGGAGTCGG CGTTCCGCTA A
 
Protein sequence
MRKRLLIVAG LAAVMAAGSA VAIADPFDSE RPNSGMDSDL LDSKLKALQE AGAPAVIAEV 
RDGDGVWEGA AGERVLGENT PPEPTDRVRA SSVALSMIAT VALQLADEGE LDLDAPIDEY
LPDVLPYEDT ITTRQMLNHT SGVPDYFVHI YGSLHQGDPT DVRDNRLNEY TPEELIAMAT
EKPLDFEPGS KFAYSNTGYT VIGLLIEDLT GKSIEDAIGE RVLDPAGLDD TYMMARDGEL
VVEGPHPNGY FDAGDGKEMI DVSELHPSQF WAGVAAVSNP RDINRFYKAM SDGTLLSPER
LAEARELSPQ SEKTYGLGLQ AFVKLPDNCA PIPDRIAYGH GGDGMGYLTW TAHSPDANRQ
VTFTFTLGYE LNPTEELNKA WRGLLYAGLC DVDINDPAVS KTLPDQSPMT LESAFR