Gene Snas_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3176 
Symbol 
ID8884375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3357656 
End bp3358126 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content64% 
IMG OID 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003511940 
Protein GI291300662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000237369 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000657439 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGTGG AAGATCTTGA CCTGGCCATT GTGGCCGCGC TGACGGCTGA TGGGCGCATG 
TCGTTCACGG ATTTGGCGGC GCGGGTGGGT TTGTCGACTT CGGCGGTCCA TCAGCGGGTC
AAGCGCTTGG AGGAGCGGGG TGTGATCGCG GGTTATACCG CGAAGATCAA CTATGAGGCG
TTGGGTTTGC CGTTGACGGC GTTCATCGCG ATTCGTCCGA TCGATCCGGC GGCTCCGGAT
GACGCGCCGC AGCGGTTGTC GGGGTTGAGT GAGATCGAGT CGTGTCATTC GGTGGCGGGC
GAGGACTACT ACTTGTTGAA GGTGCGGGTG TCGGGGCCGG CGGCGTTGGA GGATCTGTTG
GCGAAGGTGC GGTCGGTGGC GGGGGTGACG CACCGTACGA CGATCGTGTT GTCGACGCCG
TATGAGGGTC GGGCGCCGCT GTTAAGGGGG GATCGGGTCG CGGGCTGGTA G
 
Protein sequence
MNVEDLDLAI VAALTADGRM SFTDLAARVG LSTSAVHQRV KRLEERGVIA GYTAKINYEA 
LGLPLTAFIA IRPIDPAAPD DAPQRLSGLS EIESCHSVAG EDYYLLKVRV SGPAALEDLL
AKVRSVAGVT HRTTIVLSTP YEGRAPLLRG DRVAGW