| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2900 |
|---|
| Symbol | |
|---|
| ID | 8884099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3051269 |
|---|
| End bp | 3051898 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_003511668 |
|---|
| Protein GI | 291300390 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.48366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.297506 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCG ATGTCGCCCT GCTGGCTGCC TTCACCGTGA CCACGCTCGT CGCCATGATC
ACCCCCGGAC CGGACATGTT GTTCGTCCTG GGCTGCGGGA TGCGTGGCGG CCCGAGGGCC
GGGTTGCTGG CCACCGCGGG TGTTGCCGTG AGCGAGGCGG TGCACGTCAT CGTGGCCGCG
GCGGGGTTGG CGGCTCTGTT CACGGCGGTG CCGACGGCTT TCACCGTGGT GCGTTTCGCC
GGCGCGGCCT ACCTGATCTA CCTGGGCGTA CAGATGATCC GCAACCGCCG CAAGGGATCG
GATGAGATGG CGGTCGGCGG CGGGATGCTG GGTCGTCGGG CCTTCGTCAG CGGGCTGCTG
ACCAATCTCC TCAACCCGAA GATGGTCACC TTCACGATCG CGTTCCTGCC GCAGTTCATC
GATCCGTCGT TGGGGAACGT GTGGGCCCAG TTCGCGATCC TGGGGACCGT CCTCATCGTG
CTGGAGTTCA TCGTGGACGG TACGGTCGGG GTGCTGGCCG GGCGGATCGG CGGTTGGCTG
CGGCGTCGGC AGGCGGCGAA GCGGCGCATC GACACCGCCA CCGGCGGTAT CTTCATCGGG
CTCGGTATCC GGCTGGCCGT GGAGCGCTGA
|
|---|
| Protein sequence | MPIDVALLAA FTVTTLVAMI TPGPDMLFVL GCGMRGGPRA GLLATAGVAV SEAVHVIVAA
AGLAALFTAV PTAFTVVRFA GAAYLIYLGV QMIRNRRKGS DEMAVGGGML GRRAFVSGLL
TNLLNPKMVT FTIAFLPQFI DPSLGNVWAQ FAILGTVLIV LEFIVDGTVG VLAGRIGGWL
RRRQAAKRRI DTATGGIFIG LGIRLAVER
|
|---|
| |