| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1921 |
|---|
| Symbol | |
|---|
| ID | 8883113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2037573 |
|---|
| End bp | 2039213 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_003510710 |
|---|
| Protein GI | 291299432 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCG AATGGACCGA ACTGATCATC TTCACCATCC TGTTCGCCGG GGTCTCGGCG
ATGGGATTCG TCGCCGCCCG GTGGCGGCGG CCCACCACCA TGGAGCACCT CAACGAATGG
GGGCTGGGCG GACGCAACTT CGGCACCTGG ATCAGCTGGT TCCTCATCGG TGGTGACCTC
TACACCGCCT ATACGTTCGT GGCGGTACCG GCGCTGGTGT TCGGCGCGGG CGCGGCCGGG
TTCTTCGCGT TGCCCTACAC CGTGATCGCC TACCCGATCG TGTTCATGTT CCTCATCAAA
CTGTGGTCGG TGTCCAAAGA GCACGGTTTC GTCACCCCCG CCGACTTCGT GCGGGCCCGG
TTCGGGTCGC CGTTGCTGGC GCTGCTCGTC GCGATCACCG GTCTGGTGGC CACGATGCCC
TACATCGCGC TGCAGCTGGT GGGCATCGAG GCGGTGCTCA AGTCGATGGG CCTGACCGGC
AGTGGACTGG CCGGGCACCT ACCGATCGTC ATCGCCTTCG CGATCCTGGC CGCCTACACC
TACCAGTCCG GCCTGCGGGC TCCCGCGCTG ATCGCGTTCG TCAAGGACAT CCTCATCTAC
GTCGTCATCC TGGTGGCCGT CATCTACATC CCGACGCAGC TGGGTGGCTG GGACGCGATC
TTCGACAAGG CCGACACCGC CTTCACCGAG AGCGGTAAGG GTGGGCTGCT GCTCAACGAG
AACAACCAGT TGCAGTACAT CTCGCTGGCA CTGGGTTCGG CGCTGGCGCT GTTCCTGTAC
CCGCACTCGG TGACCGGGGT GCTGTCCAGC CGCAGCCGCA ACACCATCAA GCGCAACATG
TCCGCGCTGC CCGCGTACTC GTTCCTGCTG GGCCTGATCG CGCTGCTGGG TTTCATGGCG
CTGGCGGCCG GGACCAAACC GCTGCTGTTG CCCAACGGGA ATCCTGACAC CAGCACCATC
GTCCCGGAGT TGTTCAACGA CCAGTTCTCG GACTGGTTCA CCGGGGTCGC GTTCGCGGCG
GTGGGTATCG GCGCGCTGGT TCCGGCGGCG ATCATGTCGA TCGCGGCGGC GAACCTGTTC
ACCCGCAACA TCTACCGCGA GTACATCCGC AAGGACGCCA CTCCGGCGCA GGAGACCAAG
GTGTCCAAAC TGGTCTCCCT TGTGGTCAAG GTGGGCGCGG TGGTGTGCAT CATCGTGCTG
CCGCTCCAGT TCGCCATCGA TCTGCAGCTC ATCGGTGGGG TCATCATCCT GCAGACGCTG
CCGAGCCTGG CGCTGGGCGT GTTCACCCGT TGGTTCCACA AGGGTGCGCT CATCGGGGGC
TGGTTCGCGG GTATGGGTGG CGGCATGCTG ATGCTGTACT TCTGCCCGTC GGCCGACGGC
AAGCGGCCGC ACTTCGGCGG CAGTGCCTTC CCGTTGGAGA AGCTCGGCTT CGACACCAAG
ATCACCGTCT ACGCGGGACT GTTGGCCATC GCGCTCAACC TGCTGGTGGT CGTGTTGCTG
ACGCCGATCC TGAAGGCGAT GAAGGTGGCC GACGGCAAGG ACGGCACCAA GCCGCTGGAC
TACTACGTGG ACGAGGGCGA CGAGGAGAAG CCCCCGCCCG GTGACGAGAA GCCTGAGGCC
GCCGCGATTC CGACGGCCTG A
|
|---|
| Protein sequence | MNLEWTELII FTILFAGVSA MGFVAARWRR PTTMEHLNEW GLGGRNFGTW ISWFLIGGDL
YTAYTFVAVP ALVFGAGAAG FFALPYTVIA YPIVFMFLIK LWSVSKEHGF VTPADFVRAR
FGSPLLALLV AITGLVATMP YIALQLVGIE AVLKSMGLTG SGLAGHLPIV IAFAILAAYT
YQSGLRAPAL IAFVKDILIY VVILVAVIYI PTQLGGWDAI FDKADTAFTE SGKGGLLLNE
NNQLQYISLA LGSALALFLY PHSVTGVLSS RSRNTIKRNM SALPAYSFLL GLIALLGFMA
LAAGTKPLLL PNGNPDTSTI VPELFNDQFS DWFTGVAFAA VGIGALVPAA IMSIAAANLF
TRNIYREYIR KDATPAQETK VSKLVSLVVK VGAVVCIIVL PLQFAIDLQL IGGVIILQTL
PSLALGVFTR WFHKGALIGG WFAGMGGGML MLYFCPSADG KRPHFGGSAF PLEKLGFDTK
ITVYAGLLAI ALNLLVVVLL TPILKAMKVA DGKDGTKPLD YYVDEGDEEK PPPGDEKPEA
AAIPTA
|
|---|
| |