Gene Snas_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1862 
Symbol 
ID8883053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1953874 
End bp1954668 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content68% 
IMG OID 
ProductTryptophan 2,3-dioxygenase 
Protein accessionYP_003510651 
Protein GI291299373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0590393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.680607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAACG ATCTTGATCC GCGCTTCGGC GAGCAGGGCG GCAAACTCAC CTACGGTTCG 
TACCTGCGCA TCCCCGAACT GCTGGCGCAG CAACATCCCG CCTCTAACCC CGAGGCCCAC
GACGAGCTGC TGTTCATCAC CATCCACCAG GTCTACGAGC TGTGGTTCAA GCTGCTCCTG
CACGAGCTGG ACGACGCCCG CGACCGGATG CTCGACGGCG AGAGCTACCG CCCCCGGGTG
CGGCTGGACC GCTGCCACAC CATCCTGAAG GTCCTCATCG AACAGGTCGA CGTCATCGAC
ACGATGACCC CGCAGGACTT CCTCGAGTTC CGCAACCGGC TGGCCCCCGC CTCGGGCTTC
CAGTCGGTGC AGTTCCGGGA ACTGGAATTC CTGTCCGGAC TCAAGGACCC CGGATATCTG
GAGCGCTTCC GCGGCCTGTC GGAGGACGAG AGCCAGCGAC TGCGCCGCCG CCTGACCGAA
CCGAGCCTGT GGGACGGCTA CCTGGCCGCC GTCCGCCACG CCGGTTTCGC CACCGAGACC
CGCGACGAAC GCGTCGCGGC GCTGCGCGAG ATCGCCGCCG ACCGGCAGTC CTACGGGCAG
CTGTGGGACC TTGCCGAGAG CCTCGTCGAC CACGACCAGG CGCTGAGCCT GTGGCGCGCC
CGCCACGTCC TGATGGCCGA GCGCCAGATC GGCACCAAAC CCGGCACCGG CGGCAGCGCG
GGCGGCACCT ATCTGAGGTC CCGTGTGGAG CTCCGCTGCT TCCCCGAACT CTGGGAACTG
CGCAGCTTGA TGTAG
 
Protein sequence
MANDLDPRFG EQGGKLTYGS YLRIPELLAQ QHPASNPEAH DELLFITIHQ VYELWFKLLL 
HELDDARDRM LDGESYRPRV RLDRCHTILK VLIEQVDVID TMTPQDFLEF RNRLAPASGF
QSVQFRELEF LSGLKDPGYL ERFRGLSEDE SQRLRRRLTE PSLWDGYLAA VRHAGFATET
RDERVAALRE IAADRQSYGQ LWDLAESLVD HDQALSLWRA RHVLMAERQI GTKPGTGGSA
GGTYLRSRVE LRCFPELWEL RSLM