Gene Snas_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1831 
Symbol 
ID8883022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1922114 
End bp1923085 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content68% 
IMG OID 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_003510620 
Protein GI291299342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC GCCACCTGAT CGGTTCGCTG CTGGCGGTCG CCGTGGCCGC CGCGTTGACG 
TGGACGCTGG TCCCCGGTTC CGCCTCCGCG TACCCCAACG CCGCGTTCCA CATGCAGAAC
CTCGGCAACC GGGGCGCCGA CACCCTGTCG GTCCAGCACC TGCTCGCCCA GGCCGGACAC
CAGGTCGAGG CCACCGGCGC CTTCGACGCG GCCACCGAAT CGGCCGTCAA GAAGTTCCAG
GAGTCCAAGG GCCTGGACGC CGACGGCATC GTCGGCCCCA AGACCTGGGA GGCATTGGCG
CCCAACCTGG AGACCGGCGC CAGTGGCGAG GCCGTCAAGG CGCTTCAGGT GCAGCTCAAC
GCCAAACAGC GACTGTCCCT TGAGGTCAAC GGGACCTTCG ACGACGCGCT CGCCGGTGAG
GTGAGGAAGT TCCAGGAGCA CGCCAAGATC TCCGCCACCG GCGCGGTCAA CGTCGAGACC
TGGCGCAACC TGGTGTGGCA CTTCGACTAT CCCGACTTCG AGGCCGGGAC CCTGTGCGAC
CAGGACCCGG ACGGCAACGG CAAGGCCGAC TGGGGCACCG CCTCGGCCGT CGGACAGCTG
GAGGCGGGCG CCAAGACCTT CGCCGAATCC GGCAACGGCC CGCTTCCAGT GGGCGACATC
GGTTTCGAGC ACGGCGGTGA CATCCCCGGA CACGGCAGCC ACGAGGTCGG CCTCGACGTC
GACGTGTGGC CGATCCGCGG CGACTCCAAG CAGTGCGAGG CCGACCGCAT CACCTGGGAG
TCGGCCGAAT ACGACCGCGA CGCCACCCGG CAGCTGGTCA AGGACATCCG CGCCGCCGCC
TCCGGACACG TCGTCTTCAT CCTCTTCAAT GACCCGAAGC TGATCGCCGA GGGTCTGACC
AGCGAATACG CCAACCACGA CAACCACCTC CACATCCGCT ACTGCGAGGT CGGCGGCGGC
TACGCCTGCT GA
 
Protein sequence
MKRRHLIGSL LAVAVAAALT WTLVPGSASA YPNAAFHMQN LGNRGADTLS VQHLLAQAGH 
QVEATGAFDA ATESAVKKFQ ESKGLDADGI VGPKTWEALA PNLETGASGE AVKALQVQLN
AKQRLSLEVN GTFDDALAGE VRKFQEHAKI SATGAVNVET WRNLVWHFDY PDFEAGTLCD
QDPDGNGKAD WGTASAVGQL EAGAKTFAES GNGPLPVGDI GFEHGGDIPG HGSHEVGLDV
DVWPIRGDSK QCEADRITWE SAEYDRDATR QLVKDIRAAA SGHVVFILFN DPKLIAEGLT
SEYANHDNHL HIRYCEVGGG YAC