Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1818 |
Symbol | |
ID | 8883009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1906789 |
End bp | 1908000 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | glycine cleavage T protein (aminomethyl transferase) |
Protein accession | YP_003510607 |
Protein GI | 291299329 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCAGA CAATGAATCC CGCGGCAGCC CTCACGTCCA GCGCGGCTGT CCTCAATCCC GAGATCATGC TGTACACGCG ACTGCGCAAG TCGCCCTACT TCTGGAAATC CCGCGAACAC GGCGTGGCTA TGTACAGTGT GTACAACCAC ACCTATCATC CCCGGCACTA CGGTGACCCG GTCGGCGAGT ACTGGTCGCT GCTCAACGGC GTCACCATCT GGGACGTCGG CGTCGAACGC CAGGTGGAGA TCTCCGGCCC GGACGCCTTC GCGTTCACCA ACATGCTGGT GCCGCGCGAT CTGTCCAAAT GCAAGGTCGG GCAGTGCAAG TACGTCTTCA TCACCGCTCC CGACGGCGGC ATCATCAACG ACCCGGTGCT GCTTCGCCTT GAGGAGAACC GGTTCTGGCT GTCGCTGGCC GACAGCGACG TCGAACTGTG GGCACTGGGC CTTGCCCACG CGGGCGGCTG GAACGTCGAG ATCAAGGAGA TCGACGTGGC CCCGATCCAG ATCCAGGGCC CGAAGTCGCG CGAGCTCATG ATCGACCTGT TTGGTAAATC CATTCTGGAC CTGCCGTACT ACTATCTCAA CCACTACACC TTGAACGGCA TGGAGGTCGT CGTCAGCCGT ACCGGCTACA CGGCCGAGAT CGGCTACGAG ATCTACCTGT ACAACGCCGA CCACGACGCC GGGAAACTGT GGGACACGGT GTGGCAGGCC GGGGAACCGC ACGGACTGCG CCCGGTCGGG CCCTGCCACA TCCGGCGCAT CGAGGCCGGG ATGCTGGCCT ACGGCTGCGA CATCACCCGC GACACCAATC CCATGGAGGT CGGCTACGAC TACAAGTGGA TGGTCGACGT GGACCAGGAG TCCGACTTCA TCGGCAAGGC CGCGCTCAAA CGCATCCGCG ACGAGGGCAT CAGCCGGATC ATGTGCGGCG TCGAGATCGA CGGCGACCCG TTGGGCAGCT ACAACGACGG CTCCATGATC GACAGGTTCG CCGTGTACTC CGGCGACGGC GGCAAGGTCG GTGAGGTCAC CAGCGCCTGC TACTCGCCGC GCCTGGAACG CAATATCGGC CTGGCCATGC TCGACATCGG ACACAGCGAA CTGGGAACCA AGGTCGGCAT CGTGACGCCC GGCGGTCCGC GCGGCGGCGT CGTGGTCCCC AAGCCGTTCA TCGACCCGCG CAAGGAAACC CCGAAGGGGT GA
|
Protein sequence | MSQTMNPAAA LTSSAAVLNP EIMLYTRLRK SPYFWKSREH GVAMYSVYNH TYHPRHYGDP VGEYWSLLNG VTIWDVGVER QVEISGPDAF AFTNMLVPRD LSKCKVGQCK YVFITAPDGG IINDPVLLRL EENRFWLSLA DSDVELWALG LAHAGGWNVE IKEIDVAPIQ IQGPKSRELM IDLFGKSILD LPYYYLNHYT LNGMEVVVSR TGYTAEIGYE IYLYNADHDA GKLWDTVWQA GEPHGLRPVG PCHIRRIEAG MLAYGCDITR DTNPMEVGYD YKWMVDVDQE SDFIGKAALK RIRDEGISRI MCGVEIDGDP LGSYNDGSMI DRFAVYSGDG GKVGEVTSAC YSPRLERNIG LAMLDIGHSE LGTKVGIVTP GGPRGGVVVP KPFIDPRKET PKG
|
| |