Gene Snas_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1657 
Symbol 
ID8882847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1748524 
End bp1750065 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510452 
Protein GI291299174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.826128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.755126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGG ACACCCCACT GCATGTGGTG TTCGTCCACG GACTGTTCTC CTCCGACGCG 
GTGTGGGAGT CGTTCGCCTC CCGCATCGCC GACGACCCCG AGGTACCCGG CCACGTCCGG
GTGCACCGGT TCTCGTACTA CTCGCCGCTG CGACGCAAGG TGTACAAGGA GATCCCGAGC
CTGAACAACC TGGCCGACCG CCTGGGCACG TTCCTGCTGT ACGAGCTGAG TGACGCGCCG
ACCGTGGTCG TCACCCACAG CATGGGCGGG CTCATCACGC AGCGGTTCCT GGCCCGGATG
CTCAAGGACG ACCGGGGAGA AGAGCTGCGG CAGATCGAGC GCATCGTCAT GTACGCGTGC
CCCAACTTCG GTTCCGACTA CCAGCGGACC ATGCGCGACC TGGTGCGCAC CCTGGGATGG
CGCAACCCGC AGGAGGCGGA ACTGCTGCCG CTCACCGAGA ACGGCATGGA GGTGCAGGAG
GCCGTCCTGG ACCGGGTGGT CAGGGCGACC GAACACGACA AGGACCACTG TCCGATCAAG
ATCATCGCGT GTGCCGGTGT CGAGGACCGG GTCGTCAAGG CCCACATCGC CCACGGCCTG
TTCCCGGCCG AGAACCGCCG CACCGTCGAC GGCGACCACA GCTCGATCAT CCAGGTCAGC
GACGACAAAC TGTCGGCGTA CCGCATCTTC CGCAAGGAAC TCGACGAGGT GCTGGCCCCG
CGCCGCAACT CCAGTGTGGC CCGTCCGGTG GTCGTCGAAC CGGCACCGGC GGAACAGGAA
CTGACGCTGC CGCCGTTCGG GCGCCGCAAC ACCCAGCTGG TCGGCCGCGA CCAACTGCTG
TCGGAGGTGT TCGCCGACCA GTCCAGCCAC CGGGTGCGGG TGCTGGCCGG ACCCGGCGGG
ATCGGCAAGT CCCGCATCGC CCTGGAGGGA GCGCACCGGG CCCGGGAGCT TGGCGCCAAG
GTCTGGTGGG TATCCATGGA CCGCATCAAT TCCCGAATGC GGGAGGTGGC CGAGCACCTT
GACATGCCGC AACTGGAGAT CGCCCGGGCC TGGGGAGGGC AGCGCAGCGC TCCCGACCTG
GTGTGGGAGT ACCTCAACCA GCGGGCCGAA CCGTGGCTGC TGGTGTTCGA CAACGCCGAC
GACCCCCGCA AGCTCGGCAC CGACGAACGT CCGGTGCCCG ACGGGACCGG CTGGCTGCGC
GAACCCGTCA CGGGCACCGG CATGGTGATC GTGACCAGCC GGGTGGCGGA CCCGGCGATG
TGGGAACGCT GGAACAGCCT GCTGGTGGTA CCACCGCTGT CCGACACCGA TGGGGCGCGG
ATGCTGGTCA ACATGGTCGG CGAGGACGGC GGCAGCTTCG ACGGCGCCGC CCGGCTGTCG
CGGCAGCTGG GCGGTAACCC CGAGCTGATC TTCCAGACGG CGAAATACCT GAAATCCGTA
CGGAGCGACG GGCGAGGCCA AAGTGGAATC ATTGATTTCG ACGGTTACCT CCGGGAACTG
AACCGGCGCT CACCACCGCC GTCAGGAGAC GACCATGACT GA
 
Protein sequence
MPEDTPLHVV FVHGLFSSDA VWESFASRIA DDPEVPGHVR VHRFSYYSPL RRKVYKEIPS 
LNNLADRLGT FLLYELSDAP TVVVTHSMGG LITQRFLARM LKDDRGEELR QIERIVMYAC
PNFGSDYQRT MRDLVRTLGW RNPQEAELLP LTENGMEVQE AVLDRVVRAT EHDKDHCPIK
IIACAGVEDR VVKAHIAHGL FPAENRRTVD GDHSSIIQVS DDKLSAYRIF RKELDEVLAP
RRNSSVARPV VVEPAPAEQE LTLPPFGRRN TQLVGRDQLL SEVFADQSSH RVRVLAGPGG
IGKSRIALEG AHRARELGAK VWWVSMDRIN SRMREVAEHL DMPQLEIARA WGGQRSAPDL
VWEYLNQRAE PWLLVFDNAD DPRKLGTDER PVPDGTGWLR EPVTGTGMVI VTSRVADPAM
WERWNSLLVV PPLSDTDGAR MLVNMVGEDG GSFDGAARLS RQLGGNPELI FQTAKYLKSV
RSDGRGQSGI IDFDGYLREL NRRSPPPSGD DHD