Gene Snas_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1448 
Symbol 
ID8882635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1535262 
End bp1536017 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content65% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003510247 
Protein GI291298969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0318973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCT TCTCCGACAC CGGCAAGGTG TTCATCCGCG AGATCAAACC CACCCTGTAC 
GACCCGATCA GTCCACTGTT CAGCCTGGCG CAGCCGATCA TCTTCCTGGC GCTGTTGGGA
CCGCTGGTGG CGAACATGCC CTCGGCGGGC GGCGACACCT CCTGGCAGTG GTTCGTCCCC
GGCATCCTCG TGATGGTGGT GCTGTTCGGC ACCTCGATGA CCGGCTCGAA CCTGGGCTGG
GAGATGCAGA CCGGATCCCA CGAACGCGTC ATGGTGACAC CGCTGAGCCG CTCGGCGATG
CTGGTCGGCA AGTCGCTCAA GGAGATCGCG CCGCTGGCGG TGCAGACCGT CCTCATCGTC
GTCATCATGC TGCCGTTCGG ATTCAAGCTC TACTTCGGAC CCGCGTTGCT GGGGCTCGTG
ATCCTCGCGG TGATGGCCGT CGGGCTCGGC GCGCTGTCCT ACGCGCTGGC CATCGCGGCC
CGCAAGAAGG ACTGGCTGTT CTGGGCGATC CAGCAGACGG CGTTGTTCCC GCTGCTCATC
CTGTCGGGCA TGATGATGCC GCTCGACTAC GGTCCGCAGT GGATGCGAAA CGTGTCCACA
TACAACCCGG TCACCTACAT CGTCGACGCC GAACGCGCCC TGTTCTCGGG CGAACTGGCC
ACCAACACCG TCATGTACGG CGCCCTCGCG GCGCTGGGCT TCGCCGTCGT CGGCCTGCTG
GTCGGCACCA CCACCATCCG CCGCGCCACC GTCTGA
 
Protein sequence
MKFFSDTGKV FIREIKPTLY DPISPLFSLA QPIIFLALLG PLVANMPSAG GDTSWQWFVP 
GILVMVVLFG TSMTGSNLGW EMQTGSHERV MVTPLSRSAM LVGKSLKEIA PLAVQTVLIV
VIMLPFGFKL YFGPALLGLV ILAVMAVGLG ALSYALAIAA RKKDWLFWAI QQTALFPLLI
LSGMMMPLDY GPQWMRNVST YNPVTYIVDA ERALFSGELA TNTVMYGALA ALGFAVVGLL
VGTTTIRRAT V