Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1448 |
Symbol | |
ID | 8882635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1535262 |
End bp | 1536017 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | ABC-2 type transporter |
Protein accession | YP_003510247 |
Protein GI | 291298969 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0318973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCT TCTCCGACAC CGGCAAGGTG TTCATCCGCG AGATCAAACC CACCCTGTAC GACCCGATCA GTCCACTGTT CAGCCTGGCG CAGCCGATCA TCTTCCTGGC GCTGTTGGGA CCGCTGGTGG CGAACATGCC CTCGGCGGGC GGCGACACCT CCTGGCAGTG GTTCGTCCCC GGCATCCTCG TGATGGTGGT GCTGTTCGGC ACCTCGATGA CCGGCTCGAA CCTGGGCTGG GAGATGCAGA CCGGATCCCA CGAACGCGTC ATGGTGACAC CGCTGAGCCG CTCGGCGATG CTGGTCGGCA AGTCGCTCAA GGAGATCGCG CCGCTGGCGG TGCAGACCGT CCTCATCGTC GTCATCATGC TGCCGTTCGG ATTCAAGCTC TACTTCGGAC CCGCGTTGCT GGGGCTCGTG ATCCTCGCGG TGATGGCCGT CGGGCTCGGC GCGCTGTCCT ACGCGCTGGC CATCGCGGCC CGCAAGAAGG ACTGGCTGTT CTGGGCGATC CAGCAGACGG CGTTGTTCCC GCTGCTCATC CTGTCGGGCA TGATGATGCC GCTCGACTAC GGTCCGCAGT GGATGCGAAA CGTGTCCACA TACAACCCGG TCACCTACAT CGTCGACGCC GAACGCGCCC TGTTCTCGGG CGAACTGGCC ACCAACACCG TCATGTACGG CGCCCTCGCG GCGCTGGGCT TCGCCGTCGT CGGCCTGCTG GTCGGCACCA CCACCATCCG CCGCGCCACC GTCTGA
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Protein sequence | MKFFSDTGKV FIREIKPTLY DPISPLFSLA QPIIFLALLG PLVANMPSAG GDTSWQWFVP GILVMVVLFG TSMTGSNLGW EMQTGSHERV MVTPLSRSAM LVGKSLKEIA PLAVQTVLIV VIMLPFGFKL YFGPALLGLV ILAVMAVGLG ALSYALAIAA RKKDWLFWAI QQTALFPLLI LSGMMMPLDY GPQWMRNVST YNPVTYIVDA ERALFSGELA TNTVMYGALA ALGFAVVGLL VGTTTIRRAT V
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