Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1273 |
Symbol | |
ID | 8882459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1349380 |
End bp | 1350753 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | geranylgeranyl reductase |
Protein accession | YP_003510075 |
Protein GI | 291298797 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0513601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTCAC AAGCCTTGAT CCAGCCGCTG AGCAGCCCAA ATGCCACGGC CGAACTGAAA ACCGACAATC GCACCGCGAG GATCACCGTG CCCAGCAGTA ATCCAGCCCC CAACGACGCC GACGTCATAG TCGTCGGCGC GGGACCGGCT GGCTCGGCGA GCGCGTACTA CCTGGCCAGT CACGGCCTCG ACGTCCTGTT GTTGGAGAAG ACCAGTTTCC CCAGGGAGAA GGTCTGCGGC GACGGTCTGA CCCCCAAGTC GGTCAAGGCC CTCATCCGCA TGGGCATCGA CACCAGCCCC GAAGCGGGCT GGACCCACAA CAAGGGCCTG CGGGTCGTCG CCGGGGACAC GCAGCTGAGC CTCGACTGGC CGAAACTCGA CGACTACCCC GCCTACGGGC TCACCCGCAC CCGGCTCGAC TTCGACGAGC TGCTGGCCGA CCGCGCCGTG TCCGCCGGGG CCCGGCTGCT GACCGAGGTC AACGTCACCA CCCCGATCTT CGACCGCGCC GGACGCGTGT GCGGCGTCGA AGCCGTCGTC GGCGCCGAGA AGCGGCCCGC CACCTACACC GCACCGATCG TGGTGTCGGC CGACGGCGTC TCGGCCCGGA TGGCCCTGGC ACTGGGCATC GCCAAACGCG ACGACCGTCC ACTGGGGGTC GCGGTACGGC GCTACTACAA GAGCCCCGCC AAACACGACG ACGAGTACCT CGAGTCGTGG CTGCAACTGC GCAGCGCCGC CAACCCCAAC GTGCTGCTGC CCGGCTACGG CTGGATCTTC GGGCTGGGCG ACGGCCGCGT CAACGTCGGC CTCGGCGTCC TGAACTCCTC CACCGCGTTC GGCAAGACCA ACTACCGCAA GCTGTTGACC GACTGGCTGT CGTCCACCCC CGAGGAATGG GGCATGCGGG ACGAGTCGCA GGCCGACGGA CCGATCCGCG GCGCCGGGCT TCCGATGGGC TTCAACCGGG TACCGCACTA CAGCCGGGGG CTGGTGCTGG TGGGCGACTC CGGCGGCATG GTCAACCCGT TCAACGGCGA GGGCATCGCC TACGCGATGG AGTCCGGCGA GATCGCCGCC CGCTTCGTCG CCGACGCGCT GGCCAAACCC GCGGGGCCGC GCCGCGAGGC CGTCCTGCGG CAGTACCCGG TCGAACTGAA ACGCGAGTTC GGCGGCTACT ACCGGATGGG CGACATCTTC GTGAAGCTGA TCGGCAACCC GACGGTGATG CGGCTGTGCA CCGAGCACGG CCTGCACCAT CCGCTGCTGA TGCGCTTCGT TTTGAAGCTA CTGGCGAACC TCACCGACGC GCGCGGTGGC GACGCCATGG ACAAACTGAT CAACGGACTG TCGAAGGTGG CGCCTGCCGC ATGA
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Protein sequence | MHSQALIQPL SSPNATAELK TDNRTARITV PSSNPAPNDA DVIVVGAGPA GSASAYYLAS HGLDVLLLEK TSFPREKVCG DGLTPKSVKA LIRMGIDTSP EAGWTHNKGL RVVAGDTQLS LDWPKLDDYP AYGLTRTRLD FDELLADRAV SAGARLLTEV NVTTPIFDRA GRVCGVEAVV GAEKRPATYT APIVVSADGV SARMALALGI AKRDDRPLGV AVRRYYKSPA KHDDEYLESW LQLRSAANPN VLLPGYGWIF GLGDGRVNVG LGVLNSSTAF GKTNYRKLLT DWLSSTPEEW GMRDESQADG PIRGAGLPMG FNRVPHYSRG LVLVGDSGGM VNPFNGEGIA YAMESGEIAA RFVADALAKP AGPRREAVLR QYPVELKREF GGYYRMGDIF VKLIGNPTVM RLCTEHGLHH PLLMRFVLKL LANLTDARGG DAMDKLINGL SKVAPAA
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