Gene Snas_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1194 
Symbol 
ID8882380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1279174 
End bp1279440 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content63% 
IMG OID 
Product30S ribosomal protein S17 
Protein accessionYP_003509997 
Protein GI291298719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.073144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC AAGAGCGCGC GACGAGCCGC AAGGTCCGCG AGGGCCTTGT CGTCAGCGAC 
AAGATGAACA AGACCGCGGT GGTCGAGGTC GAGGACCGGG TCAAGCACCC GCTCTACGGC
AAGGTCCTGC GTCGTACGAA GAAGTACAAG GCGCACGACG AAGAGAACGA GTGCGGCATC
GGGGACCGGG TGCAGATCAT GGAGACCCGG CCGCTGTCCA AGACGAAGCG CTGGCGGATC
GTCGAGATCC TCGAGAAGGC CAAGTAA
 
Protein sequence
MSTQERATSR KVREGLVVSD KMNKTAVVEV EDRVKHPLYG KVLRRTKKYK AHDEENECGI 
GDRVQIMETR PLSKTKRWRI VEILEKAK