Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1087 |
Symbol | |
ID | 8882272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1154248 |
End bp | 1155873 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | chaperonin GroEL |
Protein accession | YP_003509890 |
Protein GI | 291298612 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAGA TCCTCAAGTT TTCCGATGAC GCCCGCCAGA ACCTGGAGCA CGGTGTCAAC CACCTGGCCG ACACCGTCAA GGTGACCCTG GGTCCCAAGG GCCGCAACGT GGTCCTCGAC CAGTCGTTCG GCGCCCCCAC GATCACCAAC GACGGCGTCA CCATCGCCAA GGAGATCGAA CTCGACGACC CGTACGCCAA CCTCGGCGCG CAGCTCGTCA AGGAGGTCGC CACCAAGACC AACGACGTCG CCGGAGACGG CACCACGACC GCCACGGTCC TGGCGCAGTC GCTGGTGCAC GGCGGCCTGA AGAACGTGGC CTCGGGCGCC AGCCCGATCG CGCTCAAGCG CGGCATGGAC GCCGCGGCCG CCGCCGTCAA CGAGGCGCTG CTGGCCCGCG CCGACCAGAT CTCCAGCAAG GAGGACATCG CCAAGGTGGC GACGGTCTCC GCGCAGGACG CCGGGATCGG TGACCTGCTG GCCGAGGCCT TCCAGTCCGT GGGCGCCGAC GGCGTCATCA CGGTCGAGGA GGGTTCGACC CTGGCGACCG AGCTGGACAT CACCGAGGGG ATGCAGTTCG ACAAGGGCTA CATCTCGCCG TACTTCGTCA CCGACCACGA GGAGCAGGAG GCCGTCCTCG AAGACGCCCT CATCCTCATC ACCAACTCCA AGATCGGTTC GATCGAGGAG CTGCTGCCGG TGCTGGAGAA GGTGCAGCCC ACCGGCAAGC CGCTGCTGAT CATCGCCGAG GACGTCGAGG GCCAGGCCCT GGCGACCCTG GTGGTCAACG CCGCGCGCGG CACCTTCCGC GCCTGCGCGG TCAAGGCCCC GGCCTTCGGC GACCGCCGCA AGGCCATGCT CGAGGACATC GCGGTGCTGA CCGGCGGACA GCTGGTCAGT GACGAGATCG GCCTCAAGCT GGACCAGGTC GGCGTCGACC AGCTGGGCAA CGCCCGGCGC GTCGTCGTCG AGAAGGACAC CACCACCATC GTGGACGGTG CTGGCGAGAA GGCCGCCGTC GACGCCCGGG TCGCGCAGAT CAAGACCCAG GCCGAGCAGA CCGACTCCAG CTGGGACCGC GAGAAGCTGG AGGAGCGGCT GGCCAAGCTG TCCGGCGGCG TCGCCGTCAT CCGGGTCGGC GCGGCCACCG AGGTCGAACT CAAGGAGCGC AAGCACCGCA TCGAGGACGC CGTCTCGGCG ACCCGCGCGG CCCTTGAGGA AGGCGTCGTC CCCGGCGGCG GCACCGCCCT GGTGGGTGTG CGCGAGGCGC TGGACAAGCT CGACGTGATC GGTGAGGAGC AGGTCGGCGT CGACCTGGTC CGCAAGTCGC TGGCGTCCCC GCTGCACTGC ATCGCGGCCA ACGCCGGTGT CTCCGGTGAC GTCGTGGTGT CCAAGGTCGA GGAGGCCGGT TGGGGTCACG GCTACAACGC GGCCACCGGC ACCTACGGTG ACCTCGCCGC CGACGGCATC GTCGACCCGG TCAAGGTGAC CCGCAACGCC GTCAACAACG CGGTCTCGAT CGCCGGTCTG ATCCTGACCA CCGACGTGCT GGTCGTGGAC AAGCCGGAGG AGCCCGCCGA CGACGACAGT CACGGGCACA GCCACGGCCA CAGCCACCCG CACTAG
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Protein sequence | MPKILKFSDD ARQNLEHGVN HLADTVKVTL GPKGRNVVLD QSFGAPTITN DGVTIAKEIE LDDPYANLGA QLVKEVATKT NDVAGDGTTT ATVLAQSLVH GGLKNVASGA SPIALKRGMD AAAAAVNEAL LARADQISSK EDIAKVATVS AQDAGIGDLL AEAFQSVGAD GVITVEEGST LATELDITEG MQFDKGYISP YFVTDHEEQE AVLEDALILI TNSKIGSIEE LLPVLEKVQP TGKPLLIIAE DVEGQALATL VVNAARGTFR ACAVKAPAFG DRRKAMLEDI AVLTGGQLVS DEIGLKLDQV GVDQLGNARR VVVEKDTTTI VDGAGEKAAV DARVAQIKTQ AEQTDSSWDR EKLEERLAKL SGGVAVIRVG AATEVELKER KHRIEDAVSA TRAALEEGVV PGGGTALVGV REALDKLDVI GEEQVGVDLV RKSLASPLHC IAANAGVSGD VVVSKVEEAG WGHGYNAATG TYGDLAADGI VDPVKVTRNA VNNAVSIAGL ILTTDVLVVD KPEEPADDDS HGHSHGHSHP H
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