Gene Snas_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1000 
Symbol 
ID8882185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1060758 
End bp1061267 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509803 
Protein GI291298525 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.642132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGTG ATCCGAAGCA TGAACGGGAC GAAGACGCGA TCCGGGCGTT CGTGGAGAAC 
TTCTCGCTGA TGTTGTCCGA ACGCGGCGTC CCCCGAATGG CCGCACGGGT ATCGACGGTC
ATGATGGTCG CCGAGGAGGA CTCGCTCACC GCCGCCGACC TCGCCGAGCG CCTGGGAGTC
AGCCCGGCGG CCGTGTCCGG CGCCCTCAAA TACCTACTTC ACGTGGGTCT GTTCGTCCGG
GAGTCCATCC CCAACTCCCG CCGCGACCGC TACCGCTTCG GCGACGACAA CTGGTACTCG
GCGGCGATCC TCAAGACCGA CTTCATGAAC CGGGCCGCCG ACGAGGTGGA CAAACTCGTC
GAGGCCGTCG GCGGACCCGG CACCCACGCC GGGCAGCGCA TGACCGAGAT GAGCGACTTC
TACCGCTTCG TCACCGACGA ACTCATGAAC ATGTACGAAC GTTGGCAGCA GCACAAGCGC
GAACGCGAGG CCGCCGCGTC CGCCCACTGA
 
Protein sequence
MAGDPKHERD EDAIRAFVEN FSLMLSERGV PRMAARVSTV MMVAEEDSLT AADLAERLGV 
SPAAVSGALK YLLHVGLFVR ESIPNSRRDR YRFGDDNWYS AAILKTDFMN RAADEVDKLV
EAVGGPGTHA GQRMTEMSDF YRFVTDELMN MYERWQQHKR EREAAASAH