Gene Snas_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0606 
Symbol 
ID8881790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp641020 
End bp642045 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509413 
Protein GI291298135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.480028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCT TGCCCTACGA AGGCGTTCGT GTGCTCGTGC TCGGCAGCGG ACCCCGCGTC 
GGCAAGGCCC GGCAACTGCT GTCCGAGGGC GGGGCGACCA TCGTCTCCAA CTTCAGTTCA
CAGGTCACCT ATGTGGTGGT CGACCGGACG GTTCCGCACA GCGCCCCCCA GGTGGTGGCC
GCCCGCCGCG CCGCGATCCC GGTCGTGACC ACCTCGGAGC TGCAGACCTG GCCCGGCATG
GAGGGCCTGG CGGCCGTCCG TTACCTGACG CCCGCACGGC TGCCGGTGTC CGGACCGGTC
ATGACCGCCA CCCCCGTACC GGTGTACACC GCGCCACTGC CGAGGCCGCG CGGTTCCTCC
GGTCCGGACA CGACCCTGAT GGCCCTGAGC TGGGCGGCGT TCCCGCTGCT CACCGGTGGC
CTCGCGATGC CGTTCATCAC CGCCCACGTG GCCCGCAAAC TCCGCTCCCG CACCCACGCG
ATGCTCGCGG CCGGATACGG CGGGGCGCTG GTGGTGTCCA TGCTGGGCTT CATCGCCGGT
GTCGGGCTGG ACGTCGACAT CTTCATCCTG GTGAGCATGT TCACCTGGTT GTGCTGCTGG
CTGGGCGGCA GCGTCCACGC GTTCCTCATG TACGAGTCGG TCTCGCGTGA CGGCGGCAGC
GACGGCGAAC CCCGGGTGTC CGACCCGCGC AACGCCCAGG CCCTCGCGGC CATCGAACAC
CGCCGCAACC TGCGCGACGA GGCACGCCAA CTCGCCAAAC GCGACCCGGT GGCCGCCCGC
GAACTGGGCA TCGGACGGCC CGACCGGCAC TCCAGTTACG ACGACGGCGG CCTGATCGAC
GTCAACAACG CCCCCGCCTC GATCCTCAAG ACCCTGCCGG GCGTCACCGA CGAGGTCGCC
CAGGAGATCA TCCGGTTCCG CGAACTGACC GGCCCGTTCG AGTCCACCTC GGACGTCGTC
GTGCACACCA GTTTCGAACC CCGCTACGTC GACCGTTTCG ACGAGCTCGC CCTGTACGTG
GCCTAG
 
Protein sequence
MNSLPYEGVR VLVLGSGPRV GKARQLLSEG GATIVSNFSS QVTYVVVDRT VPHSAPQVVA 
ARRAAIPVVT TSELQTWPGM EGLAAVRYLT PARLPVSGPV MTATPVPVYT APLPRPRGSS
GPDTTLMALS WAAFPLLTGG LAMPFITAHV ARKLRSRTHA MLAAGYGGAL VVSMLGFIAG
VGLDVDIFIL VSMFTWLCCW LGGSVHAFLM YESVSRDGGS DGEPRVSDPR NAQALAAIEH
RRNLRDEARQ LAKRDPVAAR ELGIGRPDRH SSYDDGGLID VNNAPASILK TLPGVTDEVA
QEIIRFRELT GPFESTSDVV VHTSFEPRYV DRFDELALYV A