Gene Snas_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0602 
Symbol 
ID8881786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp636883 
End bp637512 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003509409 
Protein GI291298131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACGA ACACAGGACC CGGCACCCTC CGCCCCGGCG GACGCACCGC CCGGGTACGC 
GAAGCCGTGC TGCGCGCCGC GGGAGACGCC CTGGCCGAAC ACGGCTTCAC CGGCCTGGAC
CTCGGCGACA TCGCCCGCCG CGCCGACGTC GGCCGCACCA CCGTCTACCG CCGCTGGGGC
ACCGTCACCG CCGTGGTCGC CGACCTGCTC ACCGACATGG CCGAACAATC CCTGCCGCGC
ACCGAGACCG GCTCGCTGCT GGGCGACCTG CGCGCCAACG CGCGCCTCGT CCAGCGCACC
CTCGTCGACC CCCGGCAGGG CGCGCTGTTC AAGGCCGTCA TCGCCGCCGC CACCTCGGAT
CCCGACACCC GACGGTCGCT GGCCCGGTTC TACCGCGCCC GCCTCGACGA ATGGTCCCCG
TGCGTGACCC AGGCGATCGA ACGCGGGGAA CTTCCCGCCG ACACCGATCC CGCCGAGGTC
ATCCGCGCCG TGTCGGCCCC GCTGTACTAC CGGCTGTTGG CCACCGACGA ACCACTCGAC
GCATCCGTGG CGGATCGGGC CGCCGAGGCG GCGGCAGCGG CGGCGCGTGC CGGAGCCTAC
GTCCGGCCCG CCGAGGCGAA GCCGGAGTGA
 
Protein sequence
MATNTGPGTL RPGGRTARVR EAVLRAAGDA LAEHGFTGLD LGDIARRADV GRTTVYRRWG 
TVTAVVADLL TDMAEQSLPR TETGSLLGDL RANARLVQRT LVDPRQGALF KAVIAAATSD
PDTRRSLARF YRARLDEWSP CVTQAIERGE LPADTDPAEV IRAVSAPLYY RLLATDEPLD
ASVADRAAEA AAAAARAGAY VRPAEAKPE