Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0476 |
Symbol | |
ID | 8881659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 496314 |
End bp | 497285 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003509284 |
Protein GI | 291298006 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00422983 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCGACG TGTTTGACCC CGAATCGGAC CACGGACGTG TCTATCAGGC CTTGGTGTCC GCGCCCCGCA GTACCGTCGA CGCGCTCGCG AGGCGCACGC TGCTGTCGCC GAGCGCGATC CGCGACTCGC TGACGGAGTT GCAGCAGTTC GACGCCGTGA CGCCCGTCGA CTCCACCAAG GAGGTGTGGG AGGCCCGGCG TCCCGACCTG GTGGCGGCCG AGGCGATGCG GCAGTTCGGG GCCTGGCGCA CCCAGCTGCT GGAGGCCGAG GAACGGCTGA CCACGGCGTT TCGGTACGCG CGCTACGAGG AGACCAGCGC GATGGACTTC GAGATCCTCA AGGGCGCCGA CGCGTTCTTC GAGCGTTTCA AGGTCCTGCA ACCGTCGGCG CGCAGCCACG TGTGGGCCAT CGACCGGCCG CCCTACTACT GGGAGCCGGA CGAGATCCAC CGGCAGGAAC GCATGCAGAT CGAACAGATG GCGGCGGGGA TCACCTACCG CACCATCTAT CAGGAGTCGG AGAGCGACTC GCCGGTCCGC AACGCCAGCA TGGCCCGATC GGTTGCCAGC GGCGAGAACG CCCGCGTCCT GGCCCGGCCG CCGATCAAGA TGACCATCAT CGACTGTGAG GTCGGCGTCG TCGCCCTCGA CCCGCCCGAG GGGGCCGAAG GTTCACTGTC GACACTCCTG GTGCGGCGGT CGACGCTGCT CGACGCGTTC TGCAACATCT TCGAGTCACT GTGGAGCCTG GCGGTTCCGG TCAACCTGGA CCGGCAGAAC CAGGAGCTCA GCAAGCGGGA GCGGGAGATA CTCACCCTGA TGGCTTCGGG TGCCGGAGAC GACGCGATCG CCCGTCGACT GGGGGTGTCG CGCCGCACCA TCGTCCGTCA CATTGGACGA CTGCTGGAGC ATCTGGGTTC GACCACCCGG TTCCAGGCGG GCGCCCAGGC GGCGCGGCGC GGCTGGCTCT AG
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Protein sequence | MFDVFDPESD HGRVYQALVS APRSTVDALA RRTLLSPSAI RDSLTELQQF DAVTPVDSTK EVWEARRPDL VAAEAMRQFG AWRTQLLEAE ERLTTAFRYA RYEETSAMDF EILKGADAFF ERFKVLQPSA RSHVWAIDRP PYYWEPDEIH RQERMQIEQM AAGITYRTIY QESESDSPVR NASMARSVAS GENARVLARP PIKMTIIDCE VGVVALDPPE GAEGSLSTLL VRRSTLLDAF CNIFESLWSL AVPVNLDRQN QELSKREREI LTLMASGAGD DAIARRLGVS RRTIVRHIGR LLEHLGSTTR FQAGAQAARR GWL
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