Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0262 |
Symbol | |
ID | 8881441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 273842 |
End bp | 276031 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Hemolysin-type calcium-binding region |
Protein accession | YP_003509073 |
Protein GI | 291297795 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAAC CGAAGATCAA CGTCGACTCG CAGTGGTTCG ACCTGAAAGC CGACCCCACG AAGCTGGAGA AGTCCGCCAC GAAGTGGCGG GCCATGGGCA AGAAGGGCGA CGACGTCAGC GGCGACCTGC ACGACGCCGC CAACGTGGTC CTGGACGGCA AGGGCAAGGA GTGGAAGGGC GACACCCGCG ACTCCTTCGA GACCCACAAG ACCTCGCTGG TGAAGGCCGT GGCGGGCACG AAGACTCCGT CCGACGACGT GGCCGGTGCC CTGGACGGTC TCGCGACACT GCTGCGCAAC CGGCAGGGTG ACCTGGACGC GCTGAAGACG AAGCTGCTGG GCCGGGTGGC CAACGTCGTC AACGGCGGAC AGATCACGTT CAGTCCCAAG GACGCCAAGG AGACCAAGGG CGTCATGGAC GCCGTGGCGG CGGCCCGGGG CATCCGCGAC GGTCTCGACA TCCAGATGGG CACCCACACC AGCGCGATGT CCAAGGCGGT CGGCGAGTGG CAGGCCATCA GTACCAAGTG GAGCAAGTAC GCGTCGGAGA ACGCTCCCGA CACGTTCAAA CTGCCGCCCG AGGCCGACAA CGGCACCCAG GTGCTGAAGC TGCCGGACGG TTCGGTCATC GTCAACACCG GCACCGGCGA CGAGAAGACC GACGTGCGCA CCGACAGCGA CGGCAACGTC ATCGTCACCG TGGACGGCAA GGAGTACAAG TACCCGCCGG GCACCCCGGT CGCGATCCGG GGCGGCGAGG GCGATGACGA GGTCACCATC AACCCGAGCG TCAAGAGCGA CGTCACGGTA CTGGGTGGCG AGGGCAAGGA CCAGATCGTC GACAACGGTC TGCCGGGCCA GGACCCGTCG ACGGGGCCGC GCACCATCAT CGGCGGCGAC GGCGACGACC GCATCGTCGT CAACGGCGAG AACAAGAACA TCTCCTCGGG TGCCGGGAAC GACAAGGTCA CCGCGATGGG AGACAACAAC AACGTCTCCA CCGGCGACGG CAAGGACAAC GTCGAGACCA CCGGGGGCTA CAACTCCACC GGCCGCGGCG GCGACTTCGT CCGGGCCGGG AACCACAACG ACAACCCGTT CCTGAAGGGA ATGGACGTCC ACGAGTCGAC GACCTTCGGT GGTACGGGCG ACGACGAGAT CCAGGGCAGC ACCAAGGACG ACAAGATCTC GGCCGGTTCC GGCGACGACC AGGTGTACGG CCATGAGGGC GACGACCTCG TCGACGGCGG CGCCGGACAC GACTACCTGG ACGGCCAGGA CGGCGACGAC AACATCTCCG GCGGTGCCGA CAAGGACACG GTCTACGGCC TCGACGGCGA CGACACCCTC ACCGGCGGCA GCGGTCGCGA CTATCTGGAG GGCGCCGAGG GCAACGACAC CATCGGCGGC GGCACCGAGG AGGACGTCGT CTCCGGCGGC CGGGGCGACG ACAACCTGCA CGGTGACGAC GGCGACGACG TCATGTACGC GGGCGCCGGC AAGGACACAC TGGACGGCGG CGAGGGCAAC GACAAGCAGT TCGTCCAGGA CGAGGACAAA GTGGCCAGTG ACGGTGTCGC CCCCGGCATG TGGGGCGTCA ACGACTCCGA CACGGTGCAG AAGGTCGACA TCGTCGACAA CAGCTACATC CAGGTGCGCG GCAGCGACGA GTTCCAGGAC CGGATCCGCG CCGACCTCGA CATGTACAGC TCCTCGCCGA CCGGCAAGCA GATGATGGAG AACCTGGGCG ACCGGGTCTC CGACACCCAC GACGACTGGA AACCGGGCGA GCGCGAGGTC GTCATCAAGG AGTTCGACGA GGAGAACGGG ACCGCCAGTT CCGGCAAGCT GTCGGGCAGC GACGTCGAGA TCCAGATCAA CCCGGACTTC CACCTCGACG ACCCGGGCGA GGCCACCACG TCCAAGACCG AGCGCGAGGG TGTTCCGTCG GCGATCCTGT ACCACGAGCT GGCGCACGGC TACGACTACC TGAACGACAC CTCGGCCGAC GGCCACGACA AGGGCAACGA CGCGCCGAAC GACGAACGGC AGGCGGCCGG GCTGGACTAC GACTGGACCG GTGACGGCAA GCGCGACAAC GTCCACGACA AGGACAACCC ACACCCGTAC GCGTACACCG AGAACGGTCT GCGCGACGAG ATGGGCCGCG ACCACCGCGA CGCGTACTAG
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Protein sequence | MVEPKINVDS QWFDLKADPT KLEKSATKWR AMGKKGDDVS GDLHDAANVV LDGKGKEWKG DTRDSFETHK TSLVKAVAGT KTPSDDVAGA LDGLATLLRN RQGDLDALKT KLLGRVANVV NGGQITFSPK DAKETKGVMD AVAAARGIRD GLDIQMGTHT SAMSKAVGEW QAISTKWSKY ASENAPDTFK LPPEADNGTQ VLKLPDGSVI VNTGTGDEKT DVRTDSDGNV IVTVDGKEYK YPPGTPVAIR GGEGDDEVTI NPSVKSDVTV LGGEGKDQIV DNGLPGQDPS TGPRTIIGGD GDDRIVVNGE NKNISSGAGN DKVTAMGDNN NVSTGDGKDN VETTGGYNST GRGGDFVRAG NHNDNPFLKG MDVHESTTFG GTGDDEIQGS TKDDKISAGS GDDQVYGHEG DDLVDGGAGH DYLDGQDGDD NISGGADKDT VYGLDGDDTL TGGSGRDYLE GAEGNDTIGG GTEEDVVSGG RGDDNLHGDD GDDVMYAGAG KDTLDGGEGN DKQFVQDEDK VASDGVAPGM WGVNDSDTVQ KVDIVDNSYI QVRGSDEFQD RIRADLDMYS SSPTGKQMME NLGDRVSDTH DDWKPGEREV VIKEFDEENG TASSGKLSGS DVEIQINPDF HLDDPGEATT SKTEREGVPS AILYHELAHG YDYLNDTSAD GHDKGNDAPN DERQAAGLDY DWTGDGKRDN VHDKDNPHPY AYTENGLRDE MGRDHRDAY
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