Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smon_0179 |
Symbol | |
ID | 8599877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptobacillus moniliformis DSM 12112 |
Kingdom | Bacteria |
Replicon accession | NC_013515 |
Strand | + |
Start bp | 212279 |
End bp | 215275 |
Gene Length | 2997 bp |
Protein Length | 998 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | |
Product | YadA domain protein |
Protein accession | YP_003305543 |
Protein GI | 269122966 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAGGGTG AAAGTAAATT AAAAAAATGG TTAAAAGGCA GAATAAGAAT AGACAAGAGA ATAATAATAG CCTTTTTAAT AACAGGAAGT ATTTTAAGTA ATCTATCTTA TTCAAGAGAA ACATATGAGG AAGATCCAAC AGAAACTCAA AAAGATGTAG ATTTAACAGA TGGATTTCAT CGTGGAAATT CTGCAAAATT AGATTATGAT CCTAAAAAAG TACCTAGAAT ATTAGATAAT AAGGTTCCAG GAAATACACT TGATACTACG AAAAAAAGAG GAACAGGAGT AGCCTTAGGT GCATTTTCTC ATGCAGGAAA AGGAGGAGTA GCTTTAGGAA GCCACTCATC AAGTGGGGGT GCAGTATTTG GAGTAGGTAT AGGATTTCAA GCGAGGGCAA CAAAGGCATC AGCAATAGCA ATAGGAGCAG GAAGTTATAG TAATGGATAT TATTCACAAG CATATGGAAG AAGTGCTACA GCTCTTGGAA ATGAATCAAT AGCACAAGGA GTTACATCAT TAGCAAAAGA AAAAGGTTCA ATAGCAATAG GAACAAATGC AACATCAAGT GGTGAAAATG CTATAGCTAT AGGATCATCA GCAAGAATAA GAAATGCCCT ATATCAAACA GATCAAAGTA AAAGAACAGA TGCTTCAGGA AAAAATTCAG TAGCTTTAGG TCATATGTCT CAAGCTTCTA TAGAAAATGG TATTGCTATA GGTAGTGAAT CTAAAACAAC TGTAGATAAA GGAATAGAAG GATACAATCC AAATTCTAGT GATACTGAAA CATTAAAAGG AAATGTATTA AAATCTACAC ATGCTGCTTT AGCAATAGGA AATGGTTCTA CTGTAACAAG ACAAATAACA GGACTTGCAG CAGGAAAAGA AGATACAGAT GCAGTAAATG TAGCTCAATT AAAAGCTTTA GAGAAAAAAA TTACTAATTT AAGTGATGAC ACTATAAACA AATGGAAAGA GAAACTAACA ATAGGATATA AGGTTGGGAG TGAAACAAAT TCTAAGACAG TATCTTTATC AACAGGACTA CACTTTAAAA GTAGTAATGA TAACCTAACT ATAACAAGTG GAGATAAAGG AGAAGTTAAA TTTGAATTAA AGCAAACAGA CACAATAAAT GGAACTAATG GCAGTAGTAG CAATAAACTA ACAACTGAAA AAGCAGTTAA AAGTTATGTA CAAGAGCAAA TAAAAGATGT AAAAGAAGGT AAATTTAAAG ACCTTACTAT TACTTCTAAA GATGATAGTA GTAAAAAATC AACAATTGAA ACAGATAAAG ATGGAGATCT AGCAGTAAAA AAAGGAGATA ATGGTTCATC ATCTAAGATA TTAACAGAAG CTAATGTTGG AGAAAAAGCT AAACTAAAAT ATAAAGCAAA TGGTAGTGGA GAAAAAGAAG TTGAATTAAA TAAAGGATTA AATTTTAAAG ATGGAACCAA TACTAAAGCT ACTATAGGAG AAAATGGAGA AGTTAAATAT GATTTAAATG ATAATCTAAC AGGAATAAAA TCTATTAAAG GACTTGAAAG TAGAACTACA GATAAAGATG ATTATGGAAC AAGTGATAAT GAAGGAAGAG CAGCAACAGA GGGAGCAGTT AAGAAACTAA AAGAAGAGAT AGAAAGTAAA CTAGGAGATA GTTCAAAAGA TGATCAAAGT ACTAAGAATA AAAATGGTTC AGCAGGAAAA GATGGATTAA ATGGAAAAAG TATAAATGAA AAAATAAATT CAATAAGAAG AGGAGAATCA GGTTCATTAG TTTATACAGA TGAAGAAGGA AACAGAGTAG TTAAAGCAGA TGATGGAAAG TTCTATAAAA AAGAAGATGT AGAAACAAAT GGAAAAGCTA AAGCTAATGC AACTGCTGTA ACTAATATTA GACAAAGCCT AGTAGATAAA GATGGAAGTA CTACAAACCC AACAGTATTA GGGAATGTTG GAGCAGCAAC AAAAGATACT GATGCAATTA ATTTAAAACA ATTAAAAGAT TTAGGATTAG ATCCAACAGC ACAAAATAAG AAACCAGCCC TAACTTATGA TGGAGAAAAT AAAGAAAAGA TAACTTTAGG AAAAGATACA AGTAATCCAA CAACTATAAC TAACCTAAAA GAAGGAGAAG TATCATCTAC ATCAAAAGAT GCAGTTAATG GAAAACAACT ACATGAATTA GGAGAAAAAT CATTAATATT TGGAGCAGAA GAAGGAACAA ACTTTACAAG AAATAATAAT CAAACTAAAA CAGTTGAAAT AATATCAACA AAAGAAGAGA TAAAAAAAGA TGGAAATACT TATGTAGGAA ATAATCTAAC AACAAAGATA TCAAGTAATG GAAATAAGGC GACTATTTCA GTGGGATTAA AAGAAGATCC AGAGTTTAAA GAACTAACAA TAAAAGACTA TTTTAATAAA GAAAGAATAA GATTTAGAAC AGAATATGAT AAAGGAGTAA TAGACTTTTT AAATAATGAA GGAGTAATAA GAGGTTTAGC AGATCCAGTA GATGAAAATG ATGCAGCCAA TAAGAATTAT GTAGATAATA GTGTAACAAA AGCTTTAGGA GGAGTAGCAA GTGCAATAGC GATGGCAAAT CTACCAAATG TAAGTGGAGG AGGACATAAT ATAGCAGGAT CATATGGTTA CTATAACGGA GAACATGCAT TTGCATTAGG ACTATCAGGA ACAAATGAAA AAGTAAATCT AACATATAGA GCAAGTGGAT CATTAAATAC AAGAGGGAAC ATATCATTAG GAGCAGGATT AGGTTATCAA TTTGATAATA TAAGCAAAAG AAATAAAGAA CTACTAACAC TACAAAGAAA TGGAAACATT AACTTGCTTG ATGAAAAAGT TTATGAACTA GAAAAACAAT TAAATAAAGT GGAAAAATTA AATCTTGAGT ATAAAAATGA AGTAGAAGAA TTGAAAGTTA AAGTTAATAA ATTAGAAAAA ATGCTTAATG AATTAATTAA AAAATAA
|
Protein sequence | MKGESKLKKW LKGRIRIDKR IIIAFLITGS ILSNLSYSRE TYEEDPTETQ KDVDLTDGFH RGNSAKLDYD PKKVPRILDN KVPGNTLDTT KKRGTGVALG AFSHAGKGGV ALGSHSSSGG AVFGVGIGFQ ARATKASAIA IGAGSYSNGY YSQAYGRSAT ALGNESIAQG VTSLAKEKGS IAIGTNATSS GENAIAIGSS ARIRNALYQT DQSKRTDASG KNSVALGHMS QASIENGIAI GSESKTTVDK GIEGYNPNSS DTETLKGNVL KSTHAALAIG NGSTVTRQIT GLAAGKEDTD AVNVAQLKAL EKKITNLSDD TINKWKEKLT IGYKVGSETN SKTVSLSTGL HFKSSNDNLT ITSGDKGEVK FELKQTDTIN GTNGSSSNKL TTEKAVKSYV QEQIKDVKEG KFKDLTITSK DDSSKKSTIE TDKDGDLAVK KGDNGSSSKI LTEANVGEKA KLKYKANGSG EKEVELNKGL NFKDGTNTKA TIGENGEVKY DLNDNLTGIK SIKGLESRTT DKDDYGTSDN EGRAATEGAV KKLKEEIESK LGDSSKDDQS TKNKNGSAGK DGLNGKSINE KINSIRRGES GSLVYTDEEG NRVVKADDGK FYKKEDVETN GKAKANATAV TNIRQSLVDK DGSTTNPTVL GNVGAATKDT DAINLKQLKD LGLDPTAQNK KPALTYDGEN KEKITLGKDT SNPTTITNLK EGEVSSTSKD AVNGKQLHEL GEKSLIFGAE EGTNFTRNNN QTKTVEIIST KEEIKKDGNT YVGNNLTTKI SSNGNKATIS VGLKEDPEFK ELTIKDYFNK ERIRFRTEYD KGVIDFLNNE GVIRGLADPV DENDAANKNY VDNSVTKALG GVASAIAMAN LPNVSGGGHN IAGSYGYYNG EHAFALGLSG TNEKVNLTYR ASGSLNTRGN ISLGAGLGYQ FDNISKRNKE LLTLQRNGNI NLLDEKVYEL EKQLNKVEKL NLEYKNEVEE LKVKVNKLEK MLNELIKK
|
| |