| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6486 |
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| Symbol | |
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| ID | 5320789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009622 |
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| Strand | - |
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| Start bp | 178952 |
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| End bp | 180520 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640778042 |
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| Product | transposase IS66 |
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| Protein accession | YP_001314974 |
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| Protein GI | 150378380 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3436] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.212807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.436333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCATGGA AACAACGCCG CTGCACACTC AGGACGAGCT ATCTGCTTTG CGCGCGCTCG
TCGCTGAACA GGCGGCGAAA CTCAGCGCAA GAAGCCGAAG TCAGCAAGCG CGACTCCATT
ATCGGCCTTC TGCGCGCGCA GTTGGAACTG CTGCGCCATC GACAACATGG CCCTTCTTCG
GAAAAGATAG ACCGCAAAAT CGAGCAATTC GAGCTGATGC TGGAGGAGAT CGAGGCTTCT
CGCGCTGAGG CCGATGCGCG CTCTGCGAAC TCCCCCTTGC CGGAGTTAGA CGACGAACCG
GACAAGCCGA AGCGCAGACC GCTGCCGGAT GGCCTTCCAA CTGAGGAGCT GGTCTACGCG
GCACCCTGCA ATTGTCCGAC TTGTGGTGGC ACATCTTTCC TGAAGGCGGC TGACAAGGTG
GTCCAGGTGA TGGAGCACGT ACCGGCGTCC GTAAAGATTG TCCGCCATAT CGAAAAGCGC
ATGGTCTGCA AGGACTGCGA TACGACGGTG TCTGGCGAAA TGCCGACCTT GCCGATCGGG
CGAGGCAAGC CCGGTCCGGG GTTGCTCGCG CATATCATGG TCGCCAAGTT CGACGATCAC
ATCCCGCTCT ACCGTCTCTC CGAGATGTAC GACCGCCTGG GGATAGACAT CTCCCGGTCT
GTCATGGCGG ACTGGGTTGG CCGTGTGTCC GTTCTGCTTT CGCCCCTCAT CTTGCTGATC
AGAGCCCATA TCGCCGCGGT CGACCGAATA CACACGGACG ATACCCCGGT TGATGTTCTC
GACCCTGGAC GGGGCAAAAC GAAAACCGGC AGAGTCTGGG TCTATGTCTT CGATGGCAGC
GGGTATCAAG ATCCCACTCC CAGAGCTGTC GCCTATTACT ATAGCCCCGA CCGCAAGGGC
GCGCATCCGG CAGACCACCT CGCTGACTTC AGCGGCGTGA TGCATGCCGA TGGCTACGGT
GGCTATAAGA AGCTTTACGG CAACCAGATC GTTGAGGCCG CGTGCATGGC GCACGTGCGC
CGCAAGTTCC ATGACGTAAT CAAGCTGAAG CCATCACCGA TAGCCGAGGA GGCGCTGTCT
CGCATCGGCG CGCTCTACGA TATCGAGGAT CGGATCCGCG GCATGCCGGC CGCCGAGCGC
CAAATGCTGC GACAAGAGCA CGCTGGTCCC ATTCTGAGAG ACCTGAAGTT CTGGATCGAG
GAAACGCTTC CGACTTTGCC GCAGAAACAG AAGTTGGCCG AGGCGATGCG ATATGCCCTC
TCGCGGTGGG CGGCATTGAG CGTTTACATC GACGATGGGC GCGTCGAGAT CGACAACAAT
ATAGCTGAAC GAGCCATGCG CCCGCTTGGA ATTGGTCGAA AGAACTGGCT CTTCGCCGGC
TCCGACAAGG GCGGCGAGCG CATCGCGGAT ATCCTGACTA TCATCGAGAC GGCCAAACAA
CATGGCCTCA ATCCGGAGGT CTATCTGACA GACGTCCTAA CCCGGATCCA AGATCATCCC
ACGGATCGCC TTGAGGAACT GCTGCCGTGG CAGTGGGCGC CGGCAAAAGA CCTGCACGAG
GCTGCCTGA
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| Protein sequence | MAWKQRRCTL RTSYLLCARS SLNRRRNSAQ EAEVSKRDSI IGLLRAQLEL LRHRQHGPSS
EKIDRKIEQF ELMLEEIEAS RAEADARSAN SPLPELDDEP DKPKRRPLPD GLPTEELVYA
APCNCPTCGG TSFLKAADKV VQVMEHVPAS VKIVRHIEKR MVCKDCDTTV SGEMPTLPIG
RGKPGPGLLA HIMVAKFDDH IPLYRLSEMY DRLGIDISRS VMADWVGRVS VLLSPLILLI
RAHIAAVDRI HTDDTPVDVL DPGRGKTKTG RVWVYVFDGS GYQDPTPRAV AYYYSPDRKG
AHPADHLADF SGVMHADGYG GYKKLYGNQI VEAACMAHVR RKFHDVIKLK PSPIAEEALS
RIGALYDIED RIRGMPAAER QMLRQEHAGP ILRDLKFWIE ETLPTLPQKQ KLAEAMRYAL
SRWAALSVYI DDGRVEIDNN IAERAMRPLG IGRKNWLFAG SDKGGERIAD ILTIIETAKQ
HGLNPEVYLT DVLTRIQDHP TDRLEELLPW QWAPAKDLHE AA
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