Gene Smed_6464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6464 
Symbol 
ID5320767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp110521 
End bp111258 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content60% 
IMG OID640778026 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_001314958 
Protein GI150378364 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.390646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCCC ATCCAACACT GGATAAATTG AATGCCATGG GCCTGGCCGG CATGGCAAAG 
GCCTTTGGCG AACTTGTTGC CAACGGCGAA GCCGAACATC TCTCGCACGC CGAATGGCTC
GGACTGCTGC TCGAACGGGA ATGGAGCTCC CGTTACGATC GGAAGCTTGC GGCACGCCTC
AGGTTTGCCA AGCTTCGCCA CCAGGCCACC CCAGAAGATG TCGATTATCG CGCCGACGGC
GGCCTCGACC GTGCTCTCTT CATGAAGCTG CTCGGTGGCG ACTGGATCAA CGCCCATGAC
AATCTGGCCA TTTGCGGCCC CTCGGGTGTC GGAAAGAGTT GGTTGGCTTG CGCTCTCGGC
CACAAGGCTT GCCGAGACGA TCGCTCAGTT CTCTATCAGC GTGTCCCAAG GCTGTTTGCC
CAGCTTGCGC TCGCGCGTGG TGATGGCCGC TACGCCCGCC TGCCACGAAC CTTGGGCCAT
GTTCAGCTCC TGATACTGGA TGATTGGGGG CTCGAGCCGC TCAACGAACA GGCCCGCCAC
GACCTGCTGG AAATCCTCGA AGATCGCTAT GGACGCAAAT CAACGATCAT TACCAGCCAA
CTTCCCGTGT CCGCATGGCA CGGCGTCATT GGCGACCCAA CCTACGCCGA TGCCATACTC
GACAGGTTGG TCCACAATGC CCACCGCATC GAATTGAGCG GCGATAGTCT GCGCCGAAAT
CTACCGCGCA AAGCTTGA
 
Protein sequence
MLAHPTLDKL NAMGLAGMAK AFGELVANGE AEHLSHAEWL GLLLEREWSS RYDRKLAARL 
RFAKLRHQAT PEDVDYRADG GLDRALFMKL LGGDWINAHD NLAICGPSGV GKSWLACALG
HKACRDDRSV LYQRVPRLFA QLALARGDGR YARLPRTLGH VQLLILDDWG LEPLNEQARH
DLLEILEDRY GRKSTIITSQ LPVSAWHGVI GDPTYADAIL DRLVHNAHRI ELSGDSLRRN
LPRKA