| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6462 |
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| Symbol | |
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| ID | 5320765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009622 |
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| Strand | + |
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| Start bp | 108133 |
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| End bp | 109065 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640778025 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001314957 |
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| Protein GI | 150378363 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.893515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCT TTGCCCTATT CCTCGGCGAG AAGGCTGAGC GTTACATCGA ACTGCGCCAG
TCGCTCGGCT ACTCTTTCAG CAAGCAAGCC GGCACGTTGC GAGCTTTCGT CCGCTATGTT
GAACGCGCTC AGCTCGATGC GCCCGCTACC CGGACGATGG CGCTGGACTT CGTCCTGTCG
TTCGGCGGTG CCGCCAACAG CCGCGCCACT CGTCACGGCG TGCTCAGCCG ATTCTACGAG
TATCTCGCCG TCTATGACGC CCAAACCGAG ACCTTGGAGC GCAGAGTATT CCCCAGGTCC
AGGGCGATTC CGCCTCCGCG GATCCTCAGC GAGTCAGAGT TGGCGTCGCT CATCGACGCA
TGCGCCCGCA TTTCGCCAGA CATCCCGCTC AGGGGGCGCA CGATGGCGAC GCTGATCGGA
TTGTTGGCAA GCTCGGGACT GCGATCGGGC GAAGTGGTCA GGCTTGATCG TACCGACGTC
GATCTGACCA ACGGGGTTCT CCTCGTTCAG AAGACGAAGT TCCGCAAGGA CTGTCTCGTT
CCAGTTCACA CGACGACCCA GGCTGCCCTT CGCCACTACG TGCGTGAGCG CGATACAGCT
TTTCCTCAGC CTAAGGACCA GGCCTTCTTT CTGAGCTCCC GTGGCAACCG CCTCTCTGCG
ACCGGCCTAA AAAACGGTTT TGCTGAGGTC CGCAAGTTCG CCGGCCTTGA TGACGGCAAG
CCGTTGCGGC CGCACGATCT GAGGCACCGG TTTGCCGTGA CCCGCCTGAG CCTTTGGCAC
CAGCAGCGCG CCAACGTCCA GGCGCTGCTC CCGTTGCTCG CCACCTATCT CGGCCACGCC
AGCTACAGCG ACACAGCCTA CTACCTCACT GGCTCGGTGG ATCTTCTCGC CATGGCGGCG
GAGCGCGCCT TCCTCGATGG AGGCGCAGCA TGA
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| Protein sequence | MTVFALFLGE KAERYIELRQ SLGYSFSKQA GTLRAFVRYV ERAQLDAPAT RTMALDFVLS
FGGAANSRAT RHGVLSRFYE YLAVYDAQTE TLERRVFPRS RAIPPPRILS ESELASLIDA
CARISPDIPL RGRTMATLIG LLASSGLRSG EVVRLDRTDV DLTNGVLLVQ KTKFRKDCLV
PVHTTTQAAL RHYVRERDTA FPQPKDQAFF LSSRGNRLSA TGLKNGFAEV RKFAGLDDGK
PLRPHDLRHR FAVTRLSLWH QQRANVQALL PLLATYLGHA SYSDTAYYLT GSVDLLAMAA
ERAFLDGGAA
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