Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6392 |
Symbol | |
ID | 5320695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009622 |
Strand | + |
Start bp | 52465 |
End bp | 53127 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640777973 |
Product | hypothetical protein |
Protein accession | YP_001314905 |
Protein GI | 150378311 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGCCG CGGTTCAAGC CGCATCGCCG ATGGCAGTCC CTACTGCTGC ACGCTCTGCT GCGCGGCTCC TTTCGAAGGA AGGAGCAGCT TGCACGAAAG TTGACGTGTC GCCGCGCGTC GTATTTTGGG AGGGCCATCA GGTGGAAGTA CGCATCCTAA AGCCCACCGG TCCATGCAAC GGCATTTACC TCGATTTCCA CGGTGGTGCA TGGGTGATGG GCAATGCCCG CTTCAACGAT CGGATAAACA GTGCGATCGC CAGGGAATGC CAGATGATCG TCGCCAACGT TGAATACCGT TTGGCGCGCG ATGACCGGAT CCTTCCATCC ATAGAAGACG CGCTTGCGGC GACGGTGTGG ACACTGGAAA ACATGCGGAG CGAGTTCGGA GTCGATCGAG CGGTCCTTGG AGGCGAATCC TCGGGAGCGC ATCTTGCGGC TTGCGCGCTT ACGTCGCTGT CCCTTCGGCA GTTCGATCTG TCCGCTGTCG CGGGCGCGCT TTTCTTTTAT GGCACTTACG ACATGGCAGG CACTCCTAGC CTGAGGAAGT CCTCGGGCGG GGCGCTCATC ATGCATGGCC CATCCGCCCT TAAAAATCTC AGGCGGCTGA CGTCCGGCAT GGACGAGGCG CAGCGCTCCG CGGCTGTCAC CGCTGTTCTC TGA
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Protein sequence | MDAAVQAASP MAVPTAARSA ARLLSKEGAA CTKVDVSPRV VFWEGHQVEV RILKPTGPCN GIYLDFHGGA WVMGNARFND RINSAIAREC QMIVANVEYR LARDDRILPS IEDALAATVW TLENMRSEFG VDRAVLGGES SGAHLAACAL TSLSLRQFDL SAVAGALFFY GTYDMAGTPS LRKSSGGALI MHGPSALKNL RRLTSGMDEA QRSAAVTAVL
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