Gene Smed_6392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6392 
Symbol 
ID5320695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009622 
Strand
Start bp52465 
End bp53127 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content60% 
IMG OID640777973 
Producthypothetical protein 
Protein accessionYP_001314905 
Protein GI150378311 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGCCG CGGTTCAAGC CGCATCGCCG ATGGCAGTCC CTACTGCTGC ACGCTCTGCT 
GCGCGGCTCC TTTCGAAGGA AGGAGCAGCT TGCACGAAAG TTGACGTGTC GCCGCGCGTC
GTATTTTGGG AGGGCCATCA GGTGGAAGTA CGCATCCTAA AGCCCACCGG TCCATGCAAC
GGCATTTACC TCGATTTCCA CGGTGGTGCA TGGGTGATGG GCAATGCCCG CTTCAACGAT
CGGATAAACA GTGCGATCGC CAGGGAATGC CAGATGATCG TCGCCAACGT TGAATACCGT
TTGGCGCGCG ATGACCGGAT CCTTCCATCC ATAGAAGACG CGCTTGCGGC GACGGTGTGG
ACACTGGAAA ACATGCGGAG CGAGTTCGGA GTCGATCGAG CGGTCCTTGG AGGCGAATCC
TCGGGAGCGC ATCTTGCGGC TTGCGCGCTT ACGTCGCTGT CCCTTCGGCA GTTCGATCTG
TCCGCTGTCG CGGGCGCGCT TTTCTTTTAT GGCACTTACG ACATGGCAGG CACTCCTAGC
CTGAGGAAGT CCTCGGGCGG GGCGCTCATC ATGCATGGCC CATCCGCCCT TAAAAATCTC
AGGCGGCTGA CGTCCGGCAT GGACGAGGCG CAGCGCTCCG CGGCTGTCAC CGCTGTTCTC
TGA
 
Protein sequence
MDAAVQAASP MAVPTAARSA ARLLSKEGAA CTKVDVSPRV VFWEGHQVEV RILKPTGPCN 
GIYLDFHGGA WVMGNARFND RINSAIAREC QMIVANVEYR LARDDRILPS IEDALAATVW
TLENMRSEFG VDRAVLGGES SGAHLAACAL TSLSLRQFDL SAVAGALFFY GTYDMAGTPS
LRKSSGGALI MHGPSALKNL RRLTSGMDEA QRSAAVTAVL