Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6108 |
Symbol | |
ID | 5320410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1040751 |
End bp | 1041941 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640777748 |
Product | hypothetical protein |
Protein accession | YP_001314680 |
Protein GI | 150378085 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.886348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACTC CCGCCATCGG CACTAGAAAT CGCAGGCAAG AATCAAGAAT AATCACCGCC TGTAACAGTT TGGGAACTTC GATTCGCAAT GTATCCGCAA GTCATACGCT TGCCGCGATC CAGCCACTTC TTGGACGTTA CGACATCAGC GGATTTGCCG ATCATTCGCC AAAGGGTGCA GAAACTCTGA AGTTCATAGA GGTCGTGCGC GGCAATCCGC GTTCGGGACA TCTTAATCTC GGGAAAGGCT TTAGCTTCGA GACGGCACTT GCCTCGGGAT ACATGGAAGC CATCGAGATG AGTACGGTTG AAGGTCCGCC CGAGATCGCG TTGCATGCGC TTCCTCGATC CGCGCTTCTT TATACCGGGG GCGGAAAGCC GCCGGAGCCG GATGCGGCGC CCATGATCCG TGGCGTTGAC CTGTTGTCGG CAGAGCCGGT TTACAGCCCT GTCTATGAAC ATTTTCTGTC GCCTGCCCCC TCGGCGCGGT CTGTTTCCGT CAACGGCTTG GCCAGCGGAA ACACGGTCGA GGAAGCCAGT TTACATTGTC TCTATGAACT GATCGAACGC GACTTGACTG CCCAATCCCT CCGCGACCCG GTGCTGGTGC AGCAGCTTCT CCTCAGCGAC ATTCCAGCGC CCATTTCCAA CGCCCTGACG GAACTGGAAG CGTTCGGACT ACACGCCGAA TTCTATCTTC TGGGGCAGTT CCTCGGCGTC ACTGTGCTTC AATGTGCGCT TGTAAAAACC GGATCCGGTG GCGAGGTCTA TTATGGCTGG GGCGCTCATC ACTTCCGAAC CATTGCCATT TCTCGTGCCA TGACAGAAGC CGTGCAGGCC TGGTGTACGC GCGAGGCATG CAGAGCCCAG ACGCTTCCTC TTTCGCGCAT GCCTGGCGGG GTCATGGTTT CTGCCGAGGT TCTGAAGCTT TTGAGGGAAC CTGTTACGAG GGGCGAACGT CAGTTGCGGC GGCGCTTCAT CGCCTGCCCG AGCGTTGCCT ATTCGCTCAC CGATCAGGAT GAGCAGGCAC CGGCATCGCC AACGGCTGCC CTGAACCACC TTCTCTCGTC GGCGCGGGAC GCCGGCATCC GTCATGTCTT TGCCTGGACG CTATCCCCGC CAGACCGTCC ATTTGCCGTC GTCAAATGTG CCGTCCCCGG ATTCGAAACT CCATTTGAGG AGGACGCGTG A
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Protein sequence | MTTPAIGTRN RRQESRIITA CNSLGTSIRN VSASHTLAAI QPLLGRYDIS GFADHSPKGA ETLKFIEVVR GNPRSGHLNL GKGFSFETAL ASGYMEAIEM STVEGPPEIA LHALPRSALL YTGGGKPPEP DAAPMIRGVD LLSAEPVYSP VYEHFLSPAP SARSVSVNGL ASGNTVEEAS LHCLYELIER DLTAQSLRDP VLVQQLLLSD IPAPISNALT ELEAFGLHAE FYLLGQFLGV TVLQCALVKT GSGGEVYYGW GAHHFRTIAI SRAMTEAVQA WCTREACRAQ TLPLSRMPGG VMVSAEVLKL LREPVTRGER QLRRRFIACP SVAYSLTDQD EQAPASPTAA LNHLLSSARD AGIRHVFAWT LSPPDRPFAV VKCAVPGFET PFEEDA
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