| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5929 |
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| Symbol | |
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| ID | 5320231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 891378 |
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| End bp | 893651 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640777622 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_001314554 |
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| Protein GI | 150377959 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.711138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGCT GCGCCGTTGG TGCGGCAACC ATGGTTGCCG AAGGAAGGCA GGCGTCGCCC
GCGTCCGAGG AACTTTGGCT TGCGAGCCGG GCCCTCGGAG GCGGGTTGCG CCAGACGGAG
CTAAGCGTCC CCGGCGCATA TTGCGGCGCC TGCATCGCCA CGATCGAAGG AGCGCTGCGC
ACCAAGCCCG AAGTCGAACG CGCCCGCGTC AACCTCTCCT CCCGTCGCGT TTCAATCGTC
TGGAAAGAGG AGGTCGGCGG TCGTCGGACC GATCCTTGTG ATTTCTTGCA TGCCATCGCC
GAGCGTGGAT ATCAGACACA CCTCTTTTCG CCCGGCGGGG AGGAAGGCGA CGACCTGCTG
AAGCAGTTGA TCCTCGCGGT CGCCGTTTCC GGCTTCGCCG CGACCAATAT TATGCTGCTC
TCCGTGTCAG TCTGGTCCGG GGCAGATGCG GCCACCCGCG ATCTCTTTCA TTGGATCTCG
GCGCTTATCG CCGGACCGGC GCTGATCTAT GCTGGCCGCT TTTTCTACAA GTCGGCATGG
AACGCCGTTC GCCACGGGCG AACCAACATG GATGTGCCGA TCGCGCTCGC CGTCAGCCTT
TCCTATGGCA TGTCGCTCCA CGAGACGATC GGTCATGGCG AACATGCCTG GTTCGATGCA
TCCGTGACCT TGCTGTTTTT CCTGCTGATC GGCAGAACGC TTGATCACAT GATGAGGGGC
CGTGCACGAA CGGCGATCAG CGGTCTCGCA CGCCTGTCGC CACGCGGGGC CACCGTCGTT
CATCCGGATG GCTCGCGCGA GTACCGCGCC GTCGACGAGA TCAAGCCAGG TGAACGCCTG
ATCGTCGCTG CTGGCGAGCG TATCCCCGTC GATGGACGGG TGGTGTACGG GACGAGCGAT
ATCGATCGGT CCGTGGTCAA CGGCGAGAGC TCGCCGGCGG TGGTCGCCAC AGGGGATACG
GTTCAGGCCG GCACGCTCAA CCTTACGGGT CCGCTGACGC TGGAGGCGAC CGCCGCGGCG
CGCGATTCGT TCATCGCCGA AATCATCGGA ATGATGGAGG CTGCCGAGGG GGGGAGGGCG
CGCTACCGAC GTATCGCCGA CCGCGCCGCT CGCTTTTATT CGCCCGCCGT CCATCTGCTG
GCGCTTCTGA CCTTCGTCGG CTGGATGCTG GTGGAGGGAG ATGTCCGCCA TGCCCTGCTG
ATCGCGGTGG CGGTGCTCAT CATCACATGC CCCTGCGCAC TCGGTCTTGC CGTTCCGGTC
GTCCAGGTCG TTGCAGCCGG TCGGCTATTC CAGGGCGGGG TGATGGTCAA GGATGGCTCG
GCAATGGAGC GTCTCGCCGA GATCGACATG GTGCTCCTCG ATAAGACCGG CACGCTGACC
ATCGGCAGAC CGCGGCTCGT GAATGCGCAC GAGATCGCAC CTTGTCGGCT CGCGAAGGCG
GCGGCTATCG CGTTGCATTC GCGCCATCCG ATCGCAGTAG CGATTCAGAA TTCGGCACGG
GCAGTCTCGC CGCTTGCCGG CGGCATCCGG GAAATTCCCG GCGCGGGCAT CGAAGTGAAA
ACCGAGGACG GCGTCTACCG GCTCGGGAGC CGCAATTTTG CGGTCGGCAA TCCGGGCTCT
GACGGCGGAC AATCGCAGGC AATCCTGTCG TTGGATTTTC GCGAGCTTGC CTGCTTTCGG
TTCGAGGACC GGCCGCGCCC GGCTTCGCGC GAATCGATCG AAGCCCTTGC CCGACTGGAC
ATTGCGACCG GAATCCTGTC CGGCGATCGG GAACCCGTGG TGGCGGCCCT CGCCGGCAGC
TTGGGGATTT CGAATTGGCA TGGCGACCTC TCGCCACGCG AAAAGGTCAA GGCATGCGAC
GCTGCCGCCG AGGCAGGTCA CAAGGCACTG GTAGTGGGGG ACGGCATAAA CGACGCGCCC
GTTCTGCGTG CAGCGCATGT TTCCATGGCT CCGGCGACTG CCGCCGATGT CGGACGCCAG
GCCGCCGACT TCGTCTTCAT GCATGAGCCG CTTTCGGCAG TTCCCTTCGC CATCGAGACT
TCGCGACATG CCGGCCGACT TATCCGGCAG AACTTCGCGC TCGCCATCGG CTACAACGTC
ATCGCCGTAC CAATCGCAAT TCTTGGTTAC GCGACTCCGC TCATTGCCGC TGTAGCGATG
TCCACCTCGT CGCTAGTGGT AGTCTTCAAT GCTCTGAGAC TGAAGCGAAC CCTTGCTGCC
GGTAAGGTCG CGAAAGCAGC CGCATTGATC CAATCAGGGG CGGTGACCTC ATGA
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| Protein sequence | MSCCAVGAAT MVAEGRQASP ASEELWLASR ALGGGLRQTE LSVPGAYCGA CIATIEGALR
TKPEVERARV NLSSRRVSIV WKEEVGGRRT DPCDFLHAIA ERGYQTHLFS PGGEEGDDLL
KQLILAVAVS GFAATNIMLL SVSVWSGADA ATRDLFHWIS ALIAGPALIY AGRFFYKSAW
NAVRHGRTNM DVPIALAVSL SYGMSLHETI GHGEHAWFDA SVTLLFFLLI GRTLDHMMRG
RARTAISGLA RLSPRGATVV HPDGSREYRA VDEIKPGERL IVAAGERIPV DGRVVYGTSD
IDRSVVNGES SPAVVATGDT VQAGTLNLTG PLTLEATAAA RDSFIAEIIG MMEAAEGGRA
RYRRIADRAA RFYSPAVHLL ALLTFVGWML VEGDVRHALL IAVAVLIITC PCALGLAVPV
VQVVAAGRLF QGGVMVKDGS AMERLAEIDM VLLDKTGTLT IGRPRLVNAH EIAPCRLAKA
AAIALHSRHP IAVAIQNSAR AVSPLAGGIR EIPGAGIEVK TEDGVYRLGS RNFAVGNPGS
DGGQSQAILS LDFRELACFR FEDRPRPASR ESIEALARLD IATGILSGDR EPVVAALAGS
LGISNWHGDL SPREKVKACD AAAEAGHKAL VVGDGINDAP VLRAAHVSMA PATAADVGRQ
AADFVFMHEP LSAVPFAIET SRHAGRLIRQ NFALAIGYNV IAVPIAILGY ATPLIAAVAM
STSSLVVVFN ALRLKRTLAA GKVAKAAALI QSGAVTS
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