Gene Smed_5904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5904 
Symbol 
ID5320206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp869899 
End bp870612 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID640777599 
Productdimethylmenaquinone methyltransferase 
Protein accessionYP_001314531 
Protein GI150377936 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.314397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTCT CTCTCGCGAA AGATGCTCCT GCCGCCGCGT GGCCGGCAGG CTTCGTCGTC 
AACCCGCGCC AATCGCATCT CTCGACGGAA CTGATCGAGG CCTATCGTTC CGTCCCCGTG
CCCCATGCCA GCGACTGCAT GGGCCGCCAT ACTGGCGCCC GCGGGCTTAT CGCCTATCAT
GGCGAACAAC CGGCGACGAT TGCCGGACCG GCTCTCACGG TCCGTATCCG TCCTGGCGAC
AATCTGATGA TCCACCTTGC CATCATGACG GCCGAGCCGG GTGATGTGAT CGTCATCGAC
GGCGGCGGCG ATCTCTCGAC TGCGGTCATC GGCGGTCTGA TGCGCACCAG CGCTCTTGCT
CGCGGCATCG CCGCTTTCGT GCTCGACGGC GCGCTTCGCG ATGTCGCCGA GTGGAAGGAG
GGCGGCGTTG GTGCCTTCGC GCGCGGCAAT GTGCATCGCG GCCCGAGCAA AGAAGGTCCC
GGTGCACTTA ACGTGCCGGT GGCCTGTGCG GGCCTGTCGG TGATGCCGGG CGATCTGATT
CTGGCGGATG CGGATGGTGT GGTGGCCGTG CCGGCAGCGG ACGCTGAAAG CCTGCTCGCC
AGATGCCGCG CCCATGCCGA GCGCGAACGC GCCATCAATG AAAAGAACAG GACCGGCGAG
CCGGACTGGG ACCGTTTCAA CACCTTGTTG CGGCAAAAGG GCTGCCCGGT CTGA
 
Protein sequence
MTVSLAKDAP AAAWPAGFVV NPRQSHLSTE LIEAYRSVPV PHASDCMGRH TGARGLIAYH 
GEQPATIAGP ALTVRIRPGD NLMIHLAIMT AEPGDVIVID GGGDLSTAVI GGLMRTSALA
RGIAAFVLDG ALRDVAEWKE GGVGAFARGN VHRGPSKEGP GALNVPVACA GLSVMPGDLI
LADADGVVAV PAADAESLLA RCRAHAERER AINEKNRTGE PDWDRFNTLL RQKGCPV