Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5904 |
Symbol | |
ID | 5320206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 869899 |
End bp | 870612 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640777599 |
Product | dimethylmenaquinone methyltransferase |
Protein accession | YP_001314531 |
Protein GI | 150377936 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0684] Demethylmenaquinone methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.314397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTCT CTCTCGCGAA AGATGCTCCT GCCGCCGCGT GGCCGGCAGG CTTCGTCGTC AACCCGCGCC AATCGCATCT CTCGACGGAA CTGATCGAGG CCTATCGTTC CGTCCCCGTG CCCCATGCCA GCGACTGCAT GGGCCGCCAT ACTGGCGCCC GCGGGCTTAT CGCCTATCAT GGCGAACAAC CGGCGACGAT TGCCGGACCG GCTCTCACGG TCCGTATCCG TCCTGGCGAC AATCTGATGA TCCACCTTGC CATCATGACG GCCGAGCCGG GTGATGTGAT CGTCATCGAC GGCGGCGGCG ATCTCTCGAC TGCGGTCATC GGCGGTCTGA TGCGCACCAG CGCTCTTGCT CGCGGCATCG CCGCTTTCGT GCTCGACGGC GCGCTTCGCG ATGTCGCCGA GTGGAAGGAG GGCGGCGTTG GTGCCTTCGC GCGCGGCAAT GTGCATCGCG GCCCGAGCAA AGAAGGTCCC GGTGCACTTA ACGTGCCGGT GGCCTGTGCG GGCCTGTCGG TGATGCCGGG CGATCTGATT CTGGCGGATG CGGATGGTGT GGTGGCCGTG CCGGCAGCGG ACGCTGAAAG CCTGCTCGCC AGATGCCGCG CCCATGCCGA GCGCGAACGC GCCATCAATG AAAAGAACAG GACCGGCGAG CCGGACTGGG ACCGTTTCAA CACCTTGTTG CGGCAAAAGG GCTGCCCGGT CTGA
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Protein sequence | MTVSLAKDAP AAAWPAGFVV NPRQSHLSTE LIEAYRSVPV PHASDCMGRH TGARGLIAYH GEQPATIAGP ALTVRIRPGD NLMIHLAIMT AEPGDVIVID GGGDLSTAVI GGLMRTSALA RGIAAFVLDG ALRDVAEWKE GGVGAFARGN VHRGPSKEGP GALNVPVACA GLSVMPGDLI LADADGVVAV PAADAESLLA RCRAHAERER AINEKNRTGE PDWDRFNTLL RQKGCPV
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