Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5900 |
Symbol | |
ID | 5320202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 864541 |
End bp | 865452 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640777595 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001314527 |
Protein GI | 150377932 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0688028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.469982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTG CATCATTGGC ATTCACGCTG ACTGTCCTCG CCTCCTCCGC TCTGGCCGCC GAGGTCAAAC CGCTCGTCGA CGCCGAATGG GTCAAGGCGA AGGCCGGCGA CGAAAACGTG GTTATCCTCG ACATCCGCGA CAAGGTCGCC GAGACCGAGC TGGGCGACAA GCCCTACATC GAGGGAGCGG TGGTCGCGCC CTATGCGAGC GCCGGCTGGC GCACCGAGGT GGACGGCGTC CCCGGCATGC TGCCGCCGCT CGAGCAGATC ACCAAGCTGA TCGGCGATCT CGGCATCGAC AATGACGATC ACGTCGTCAT CATACCCTGG GGCACCGATT CGAGCGAATT CGGAGGCGCG ACCCGCATCT ATTGGACCTT CAAATATCTC GGTCATGACG AGGTTTCGAT CCTCGATGGC GGTTGGCGGC AATACGACGC CGCCGGCGGC GCGCGTTCCG CGGAGCCGGC AAAGCCTGAA CCGGCCACCT TCGCCGCCGA GCCGCAGGAA GAGCTGCTGG CGACGACCGA GGAAGTCGCC GCGGCGCTCG AAGCCGGCAA AAAGCTCATC GACGGTCGCC CGGCCGAGCA ATACGAGGGC AAGTCGAAGA GCCCGATCGT GCGCGCCAAC GGCACGATCC CGGGCTCAGC CAATATCGAG CATTCCAAGC TCTACAGCAA GGACCACGCC CTCTTTGCGC GACCCGAGAC GGTGAAGGCG CTGACCGAGG CGGTGGGTCT GGCCGCGGAT GAGGAGAACA TCACATTCTG CAACACCGGT CACTGGGCAT CTGTCACCTG GTTTGCCCTT TCCGAGGTAC TGGGCAACAA GAAGACGAGC ATGTATGACG GTTCGATGGC CGAATGGACG GCCGACCCGG CGCGTGCGGT CGAGAACAAG TCGGGCACCT GA
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Protein sequence | MRLASLAFTL TVLASSALAA EVKPLVDAEW VKAKAGDENV VILDIRDKVA ETELGDKPYI EGAVVAPYAS AGWRTEVDGV PGMLPPLEQI TKLIGDLGID NDDHVVIIPW GTDSSEFGGA TRIYWTFKYL GHDEVSILDG GWRQYDAAGG ARSAEPAKPE PATFAAEPQE ELLATTEEVA AALEAGKKLI DGRPAEQYEG KSKSPIVRAN GTIPGSANIE HSKLYSKDHA LFARPETVKA LTEAVGLAAD EENITFCNTG HWASVTWFAL SEVLGNKKTS MYDGSMAEWT ADPARAVENK SGT
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