| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5886 |
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| Symbol | |
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| ID | 5320188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 849926 |
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| End bp | 850966 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777581 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001314513 |
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| Protein GI | 150377918 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0513259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.651755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTA CGCGCAGGAC GGTGGGCAGA TGGACGTTGG GGCTGTTGGG GGTGGCATTC
GCCATGCCGT CTCTGGCGGC CGATTTGCCT AAACCTTTCG ATAAGCCCGG CGAGGTGAAA
ATCGCGCTCG TGCGATACCT GTCGACAGGC GATTTTTTCC AGTCCTACCT TGCGGGCGTC
GAGGCGCAGG CCAAGGCGCT CGGCGTCGAG CTGCAGGTCT TGGACAGCCG TCAGGACGCT
GCGCTCCAGG CAGACATGGT CGACCAGGCG ATCGCGCTGG GCGTGCAGGG CATCATTATC
CAGCACGGTC TGACGGAATC CATGAAGGAA GCCGCCCAGC GCGCGGTCGA CGCCGGCATC
AAGGTCGTTG CCTTCGACGT GAATGTCGAG AACGAGAATA TTCCGCAGAT CGAACAGTCC
GACCGCGACC TCGCCCGCCT TGCGCTCGAA CAGGCGGTCA AGGACAACGG CGAGAGCTTT
AAGGCCGGCT ACGTCTATGT CGCCGGAATT GCGCCGCTTG ACCGTCGCGA CGAGACCTGG
AAGGCGTTCA AGGCGAAGTA CTCGGGCATC AACGAAGCCG CGCAGTTCGG CACGATGGAC
AATCCGATCG CCAATTCGGT GGCCAACCAG GCCCGGTCCG TGATTTCCGC CAACCCGGAC
ATCACCGTGA TGTTCGCCCC TTACGACGAG TTCGCCAAGG GTGTGAAGAT TGCGGTAGAC
GAGGCGGGAA TGTCCTCCAG CGTGAAGATC TATTCGGCCG ACATCTCGAC CTCGGACATC
GCGGCCATGC GTGAACCGGA TTCCGCCTGG GTTGCGACCG CGGCAACGAA CCCGGCCGTC
GTGGGTCAGG TTTCCGTTCG CGCGCTCGCC ATGCTGCTCG CGGGCGAGGA TCCGGGCCGT
CAGGTCATCG TACCGCCGAC GCTCATCACC CAGAAGGATC TGAACGATCA GGACATCAAG
AATATGGAAG ATCTCGGTGC AAAGCTGCCG CAGTTCGCCC ATGCCGAAGT CGCGATGCCT
GGCTGGATGC CCAGGCCCTG A
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| Protein sequence | MNITRRTVGR WTLGLLGVAF AMPSLAADLP KPFDKPGEVK IALVRYLSTG DFFQSYLAGV
EAQAKALGVE LQVLDSRQDA ALQADMVDQA IALGVQGIII QHGLTESMKE AAQRAVDAGI
KVVAFDVNVE NENIPQIEQS DRDLARLALE QAVKDNGESF KAGYVYVAGI APLDRRDETW
KAFKAKYSGI NEAAQFGTMD NPIANSVANQ ARSVISANPD ITVMFAPYDE FAKGVKIAVD
EAGMSSSVKI YSADISTSDI AAMREPDSAW VATAATNPAV VGQVSVRALA MLLAGEDPGR
QVIVPPTLIT QKDLNDQDIK NMEDLGAKLP QFAHAEVAMP GWMPRP
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