Gene Smed_5869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5869 
Symbol 
ID5320171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp831026 
End bp831673 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content61% 
IMG OID640777564 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001314496 
Protein GI150377901 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC TCTACGATTA CGAACTCTCG GGCAATTGCT ACAAGCTCAG ACTTCTGATG 
AGCATGCTCG GCATCGAGTA CAATACGGTA CCGGTCGATT TCTACCCCGG CCGCGAACAC
AAGTCGGATT GGTTCCTGAG ACTCAATCCG CTCGGACAAC TGCCGGTGAT CGAGGATGAC
GGACTGGTGC TGCGCGACGC GCAGGCGATC CTCGTCTATC TCGCCTCCAA ATATGATCCT
TCCGGCACCT GGTACCCGCG CAGCGATCCG GCGCTTCTCG GCGAGATCAG CCAATGGCTC
GCCTTTGCCG ACGGTATCAC CGGCACGGCT TCGGCCGCAC GTCTCCATGA CGGCCTATTC
TACGATCTTG ACGTCGAGTC GGCTCGAGCC GGGGCGCACA GGCTGTTTCG CATCCTCGAC
GAACACCTCT GGTTCGGCGA GCAGGAACGG CGTGATTGGA TCTGCTCGGG GCAACATCCG
ACAGTCGCCG ACATCGCGTG CTTCCCCTAC GTCATGCTGT CCGAAGAGGG TGGGGTCTCC
AGGCAGGATT ACCCGGCAAT TCGCCGCTGG TGCGATCGCG TCAAGCGAAT CAAAGGGTTT
ACGGTCATGT CCGGGATCTT TCCCGCCGGC CCTGCGCGTG CGGCCTGA
 
Protein sequence
MITLYDYELS GNCYKLRLLM SMLGIEYNTV PVDFYPGREH KSDWFLRLNP LGQLPVIEDD 
GLVLRDAQAI LVYLASKYDP SGTWYPRSDP ALLGEISQWL AFADGITGTA SAARLHDGLF
YDLDVESARA GAHRLFRILD EHLWFGEQER RDWICSGQHP TVADIACFPY VMLSEEGGVS
RQDYPAIRRW CDRVKRIKGF TVMSGIFPAG PARAA