Gene Smed_5775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5775 
Symbol 
ID5320077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp746167 
End bp747222 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content63% 
IMG OID640777482 
ProductCheB methylesterase 
Protein accessionYP_001314414 
Protein GI150377819 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.305109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0114138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGACG TCATAGCCAT AGGAGGTTCG CTCGGCGCGG TGGCAGCTTT GAAGCACCTG 
CTTGGCAAAC TTCCGGGCGA CTTCGCCGCC GCTGTATTCG TCGTCATACA TGTCGGCGCA
GGCGGCAATG ACCTACTCGC AGATATATTC GATGCGCATG CCGAAATTCC AGTCACCACC
GCTGTCGACG GGGAGCACGT CGAACCTGGA CACGTCTATG TTGCGCCCGC GGACCACCAT
CTCCTCGTCA TCGACGGTAT CATCAGGCTT GGCCGAGGAC CCCGCGAGAA CCTGGCCCGA
CCGGCGGTCG ACCCTCTCTT TCGATCGGTC GGTTTGAACT ACGGACCGCG CGCCATCGCG
GTCGTACTCA CGGGGATGTT GAATGACGGG GCCGCCGGCC TTGCCGATGT CAAGCGGTGC
GGTGGACTGA CCGTCGTCCA GAACCCTAGC GACGCAGTTG CACCGGACAT GCCGATGGGG
GCCCTGAGGG CAAGCGACGT CGATCATCGC GCGCCCCTCG ACGGTCTCGC CGCACTCCTC
ATCGAGCTCA CCCACGAAGA GGCCGGTCCG CCAATTCCCG TCCCGACCGA CATCAAGCTC
GAGGTCGATA TCGCGCTCGG CCGGCAGATC GGTTCCGAGA AAATGCTAAA CATCGCGGAC
CCGGTTCCGA TCTCGTGCCC CGCCTGCGGC GGCGTGCTTT CGCAGATCAA GAGTTGGCCG
CCGCTGCGGT TTCGGTGTCA AGTCGGGCAT GCCTATACGT CCGAGGCTTT GGTTGCGGAG
TCGGAGGGCG CCGTCGACGA GGCGCTGAGA GTTGCCCTTC GTATAATCGA GGAGAGGGTG
ACTCTCAGCG AAAAAATGGC AGACGATGCA GATCATAGCG GTTTCGCCGC CGCCGCCGCC
GCATACAGAA GGCGGGCCGA TGAGGGACGG GAGCACGCGG AGACACTTCG CTACGCCATA
ATCGGCGTTG CCTCGGAGGC AACTGCAGGC GAATTGGAGC ACGACGGTAG GGCCGCCGCC
AAAAATCCGG GTCACATCGA CCCGGAATCA TCTTGA
 
Protein sequence
MRDVIAIGGS LGAVAALKHL LGKLPGDFAA AVFVVIHVGA GGNDLLADIF DAHAEIPVTT 
AVDGEHVEPG HVYVAPADHH LLVIDGIIRL GRGPRENLAR PAVDPLFRSV GLNYGPRAIA
VVLTGMLNDG AAGLADVKRC GGLTVVQNPS DAVAPDMPMG ALRASDVDHR APLDGLAALL
IELTHEEAGP PIPVPTDIKL EVDIALGRQI GSEKMLNIAD PVPISCPACG GVLSQIKSWP
PLRFRCQVGH AYTSEALVAE SEGAVDEALR VALRIIEERV TLSEKMADDA DHSGFAAAAA
AYRRRADEGR EHAETLRYAI IGVASEATAG ELEHDGRAAA KNPGHIDPES S